Pre_GI: BLASTP Hits

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Query: NC_009092:1599526:1618274 Shewanella loihica PV-4, complete genome

Start: 1618274, End: 1619782, Length: 1509

Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015500:1923514:1956461195646119580111551Treponema brennaborense DSM 12168 chromosome, complete genomepolysaccharide biosynthesis protein1e-76287
NC_013037:48900:7541775417769491533Dyadobacter fermentans DSM 18053, complete genomepolysaccharide biosynthesis protein2e-63243
NC_019904:5241444:5275802527580252773311530Echinicola vietnamensis DSM 17526 chromosome, complete genomehypothetical protein8e-59228
NC_009615:2184300:2199149219914922006781530Parabacteroides distasonis ATCC 8503 chromosome, complete genometransmembrane protein1e-57224
NC_015164:4023881:4032926403292640344641539Bacteroides salanitronis DSM 18170 chromosome, complete genomepolysaccharide biosynthesis protein1e-57224
NC_015500:533528:5493495493495509561608Treponema brennaborense DSM 12168 chromosome, complete genomepolysaccharide biosynthesis protein2e-57223
NC_015164:325212:3274393274393289741536Bacteroides salanitronis DSM 18170 chromosome, complete genomemulti antimicrobial extrusion protein MatE6e-55215
NC_015500:2112975:2134862213486221365531692Treponema brennaborense DSM 12168 chromosome, complete genomemulti antimicrobial extrusion protein MatE9e-55214
NC_015500:2197000:2205199220519922067371539Treponema brennaborense DSM 12168 chromosome, complete genomepolysaccharide biosynthesis protein2e-53210
NC_003228:3212500:3250670325067032522141545Bacteroides fragilis NCTC 9343, complete genomeputative transmembrane protein9e-51201
NC_015311:24071:3229732297338501554Prevotella denticola F0289 chromosome, complete genomepolysaccharide biosynthesis protein2e-48194
NC_014033:2080818:2131012213101221325681557Prevotella ruminicola 23 chromosome, complete genomehypothetical protein4e-47189
NC_006347:3166000:3189164318916431906991536Bacteroides fragilis YCH46, complete genomeputative flippase3e-46186
NC_010334:1783500:1791556179155617930941539Shewanella halifaxensis HAW-EB4, complete genomepolysaccharide biosynthesis protein2e-45183
NC_015740:2587323:2603077260307726045941518Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completeputative transmembrane protein1e-44181
NC_015311:1612366:1620568162056816220941527Prevotella denticola F0289 chromosome, complete genomepolysaccharide biosynthesis protein2e-44180
NC_014370:1117283:1139451113945111409771527Prevotella melaninogenica ATCC 25845 chromosome chromosome I,polysaccharide biosynthesis protein2e-41170
NC_015164:3210885:3220225322022532217631539Bacteroides salanitronis DSM 18170 chromosome, complete genomepolysaccharide biosynthesis protein4e-40166
NC_014033:522363:5317935317935333161524Prevotella ruminicola 23 chromosome, complete genomehypothetical protein1e-38161
NC_015567:1660462:1672507167250716740271521Serratia sp. AS9 chromosome, complete genomehypothetical protein5e-35149
NC_015566:1659288:1672495167249516740151521Serratia sp. AS12 chromosome, complete genomehypothetical protein5e-35149
NC_016513:1958500:1983326198332619848491524Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completepolysaccharide biosynthesis protein1e-34148
NC_013416:1621469:1645377164537716469091533Aggregatibacter actinomycetemcomitans D11S-1, complete genomepolysaccharide biosynthesis protein9e-34145
NC_009614:3385187:3386588338658833881051518Bacteroides vulgatus ATCC 8482 chromosome, complete genometransmembrane protein2e-33144
NC_009615:4642500:4658447465844746599701524Parabacteroides distasonis ATCC 8503 chromosome, complete genomeflippase9e-32138
NC_010468:1775000:1786050178605017875881539Escherichia coli ATCC 8739, complete genomeputative transmembrane protein6e-29129