Pre_GI: BLASTP Hits

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Query: NC_009092:1127000:1147752 Shewanella loihica PV-4, complete genome

Start: 1147752, End: 1148849, Length: 1098

Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012725:97681:1043931043931054871095Burkholderia glumae BGR1 plasmid bglu_4p, complete sequencePutative restriction endonuclease1e-140499
NC_011386:136223:1667791667791678431065Oligotropha carboxidovorans OM5, complete genomeBsuBIPstI restriction endonuclease domain protein8e-94344
NC_009484:857384:8810398810398821181080Acidiphilium cryptum JF-5 chromosome, complete genomeBsuBIPstI restriction endonuclease domain-containing protein3e-93342
NC_009256:176403:1981511981511992331083Burkholderia vietnamiensis G4 chromosome 1, complete sequenceBsuBIPstI restriction endonuclease domain-containing protein1e-80300
NC_015850:2048251:212910421291042129655552Acidithiobacillus caldus SM-1 chromosome, complete genomeBsuBIPstI restriction endonuclease domain-containing protein1e-24114
NC_015953:3860467:386949138694913870483993Streptomyces sp. SirexAA-E chromosome, complete genomeType II site-specific deoxyribonuclease1e-1584.3
NC_009767:4819000:4826386482638648288902505Roseiflexus castenholzii DSM 13941, complete genome8e-1478.2
NC_015436:270820:279059279059279970912Spirochaeta coccoides DSM 17374 chromosome, complete genomeType II site-specific deoxyribonuclease5e-1272.4