Pre_GI: BLASTP Hits

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Query: NC_009012:3653111:3667119 Clostridium thermocellum ATCC 27405, complete genome

Start: 3667119, End: 3667194, Length: 76

Host Lineage: Clostridium thermocellum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain is a well studied producer of endoglucanase and several restriction endonucleases. Thermophilic cellulose degrading bacterium. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. This organism is a thermophilic anaerobe that produces an extracellular enzyme system capable of degrading crystalline cellulose to soluble sugars that are further utilized as the carbon source for growth.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009012:2806000:28167302816730281680576Clostridium thermocellum ATCC 27405, complete genometRNA-Ala1e-0651.6
NC_017068:2661419:26754882675488267556376Selenomonas ruminantium subsp. lactilytica TAM6421, completetRNA-Ala2e-0651.2
NC_017068:130226:13535913535913543476Selenomonas ruminantium subsp. lactilytica TAM6421, completetRNA-Ala2e-0651.2
NC_015437:1038476:10466791046679104675476Selenomonas sputigena ATCC 35185 chromosome, complete genometRNA-Ala2e-0651.2
NC_014410:403776:45069745069745077276Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,tRNA-Ala8e-0649.3
NC_014538:1975385:19885221988522198859776Thermoanaerobacter sp. X513 chromosome, complete genometRNA-Ala8e-0649.3
NC_003869:2143892:21549532154953215502876Thermoanaerobacter tengcongensis MB4, complete genometRNA-Ala8e-0649.3
NC_014209:1910109:19231381923138192321376Thermoanaerobacter mathranii subsp. mathranii str. A3 chromosome,tRNA-Ala8e-0649.3
NC_015555:327562:37452137452137459676Thermoanaerobacterium xylanolyticum LX-11 chromosome, completetRNA-Ala8e-0649.3
NC_016894:3329562:33444843344484334455976Acetobacterium woodii DSM 1030 chromosome, complete genometRNA-Ala8e-0649.3
NC_016894:2809125:28195392819539281961476Acetobacterium woodii DSM 1030 chromosome, complete genometRNA-Ala8e-0649.3
NC_008346:36176:45777457774585276Syntrophomonas wolfei subsp. wolfei str. Goettingen, completetRNA-Ala8e-0649.3
NC_014964:388458:43553943553943561476Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completetRNA-Ala8e-0649.3
NC_018664:2459994:24717502471750247182576Clostridium acidurici 9a chromosome, complete genometRNA-Ala8e-0649.3
NC_014209:1487699:15058001505800150587576Thermoanaerobacter mathranii subsp. mathranii str. A3 chromosome,tRNA-Ala8e-0649.3
NC_009922:42696:64740647406481576Alkaliphilus oremlandii OhILAs, complete genometRNA-Ala6e-0649.3
NC_009922:1917271:19276921927692192776776Alkaliphilus oremlandii OhILAs, complete genometRNA-Ala6e-0649.3
NC_009922:2590317:26083132608313260838876Alkaliphilus oremlandii OhILAs, complete genometRNA-Ala6e-0649.3
NC_014624:2668157:26927942692794269286976Eubacterium limosum KIST612 chromosome, complete genometRNA-Ala8e-0649.3
NC_010321:429720:44012344012344019876Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, completetRNA-Ala8e-0649.3
NC_015958:2251619:22736442273644227371976Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genometRNA-Ala8e-0649.3
NC_018664:3009166:30206993020699302077476Clostridium acidurici 9a chromosome, complete genometRNA-Ala8e-0649.3
NC_019970:336472:40582040582040589576Thermoanaerobacterium thermosaccharolyticum M0795, complete genometRNA-Ala8e-0649.3
NC_014614:1090000:10985011098501109857676Clostridium sticklandii, complete genometRNA-Ala1e-0548.9
NC_014614:2500301:25138562513856251393176Clostridium sticklandii, complete genometRNA-Ala1e-0548.9
NC_014614:554949:57155157155157162676Clostridium sticklandii, complete genometRNA-Ala1e-0548.9