Pre_GI: BLASTP Hits

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Query: NC_009012:3421000:3437983 Clostridium thermocellum ATCC 27405, complete genome

Start: 3437983, End: 3438186, Length: 204

Host Lineage: Clostridium thermocellum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain is a well studied producer of endoglucanase and several restriction endonucleases. Thermophilic cellulose degrading bacterium. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. This organism is a thermophilic anaerobe that produces an extracellular enzyme system capable of degrading crystalline cellulose to soluble sugars that are further utilized as the carbon source for growth.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016627:4490435:449794544979454498148204Clostridium clariflavum DSM 19732 chromosome, complete genome50S ribosomal protein L295e-1683.2
NC_011898:874457:899032899032899235204Clostridium cellulolyticum H10, complete genomeribosomal protein L297e-1372.4
NC_020134:2801199:281853728185372818737201Clostridium stercorarium subsp. stercorarium DSM 8532, complete50S ribosomal protein L292e-1167.4
NC_014152:305955:322514322514322717204Thermincola sp. JR, complete genomeribosomal protein L293e-1167.4
NC_014410:403776:433736433736433939204Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,ribosomal protein L294e-1167
NC_019970:336472:388855388855389058204Thermoanaerobacterium thermosaccharolyticum M0795, complete genomeribosomal protein L294e-1167
NC_015555:327562:357549357549357752204Thermoanaerobacterium xylanolyticum LX-11 chromosome, completeribosomal protein L294e-1167
NC_021182:4557608:457162845716284571831204Clostridium pasteurianum BC1, complete genomeribosomal protein L294e-1166.6
NC_013921:1977444:200692020069202007129210Thermoanaerobacter italicus Ab9 chromosome, complete genomeribosomal protein L295e-1166.2
NC_014209:1910109:193959319395931939802210Thermoanaerobacter mathranii subsp. mathranii str. A3 chromosome,ribosomal protein L295e-1166.2
NC_015958:2251619:229008922900892290298210Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genome50S ribosomal protein L296e-1166.2
NC_014964:388458:418891418891419100210Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, complete50S ribosomal protein L291e-1065.1
NC_014538:1998180:200496220049622005171210Thermoanaerobacter sp. X513 chromosome, complete genome50S ribosomal protein L291e-1065.1
NC_010320:881351:909413909413909622210Thermoanaerobacter sp. X514 chromosome, complete genome50S ribosomal protein L291e-1065.1
NC_015687:3252233:326674332667433266946204Clostridium acetobutylicum DSM 1731 chromosome, complete genome50S ribosomal protein L291e-1065.1
NC_003030:3251941:326511632651163265319204Clostridium acetobutylicum ATCC 824, complete genomeRibosomal protein L291e-1065.1
NC_009437:2367842:240085224008522401070219Caldicellulosiruptor saccharolyticus DSM 8903, complete genomeribosomal protein L291e-1065.1
NC_017295:3250451:326437332643733264576204Clostridium acetobutylicum EA 2018 chromosome, complete genome50S ribosomal protein L291e-1065.1
NC_014393:4482896:449750644975064497718213Clostridium cellulovorans 743B chromosome, complete genome50S ribosomal protein L292e-1064.7
NC_011899:124500:140891140891141106216Halothermothrix orenii H 168, complete genomeribosomal protein L292e-1064.3
NC_014657:1540500:155128615512861551504219Caldicellulosiruptor owensensis OL chromosome, complete genomeribosomal protein l292e-1064.3
NC_015949:1180755:121305012130501213268219Caldicellulosiruptor lactoaceticus 6A chromosome, complete genome50S ribosomal protein L292e-1064.3
NC_014392:969498:977978977978978196219Caldicellulosiruptor obsidiansis OB47 chromosome, complete genomeribosomal protein L292e-1064.3
NC_014721:1777644:181006218100621810280219Caldicellulosiruptor kristjanssonii 177R1B chromosome, completeribosomal protein l292e-1064.3
NC_012034:1783912:181633318163331816551219Anaerocellum thermophilum DSM 6725, complete genomeribosomal protein L292e-1064.3
NC_014720:1140765:114925311492531149471219Caldicellulosiruptor kronotskyensis 2002 chromosome, completeribosomal protein l292e-1064.3
NC_014652:1032711:104188610418861042104219Caldicellulosiruptor hydrothermalis 108 chromosome, completeribosomal protein l292e-1064.3
NC_014624:3741764:375512637551263755329204Eubacterium limosum KIST612 chromosome, complete genome50S ribosomal protein L294e-1063.5
NC_013385:1504650:151223415122341512443210Ammonifex degensii KC4, complete genomeribosomal protein L298e-1062.4
NC_010674:222016:254113254113254325213Clostridium botulinum B str. Eklund 17B, complete genomeribosomal protein L291e-0962
NC_010723:223935:256022256022256234213Clostridium botulinum E3 str. Alaska E43, complete genomeribosomal protein L291e-0962
NC_010718:193231:224366224366224563198Natranaerobius thermophilus JW/NM-WN-LF, complete genomeLSU ribosomal protein L29P1e-0961.6
NC_014328:4387303:444111944411194441331213Clostridium ljungdahlii ATCC 49587 chromosome, complete genome50S ribosomal protein L292e-0961.6
NC_009454:316000:333367333367333570204Pelotomaculum thermopropionicum SI, complete genome50S ribosomal protein L292e-0961.2
NC_018515:223164:243012243012243215204Desulfosporosinus meridiei DSM 13257 chromosome, complete genome50S ribosomal protein L293e-0960.5
NC_016584:233486:241739241739241942204Desulfosporosinus orientis DSM 765 chromosome, complete genome50S ribosomal protein L293e-0960.5
NC_014654:2101500:210843921084392108654216Halanaerobium sp. 'sapolanicus' chromosome, complete genomeribosomal protein L293e-0960.5
NC_008262:2598920:261273726127372612946210Clostridium perfringens SM101, complete genomeribosomal protein L293e-0960.5
NC_003366:2731995:274770427477042747913210Clostridium perfringens str. 13, complete genome50S ribosomal protein L293e-0960.5
NC_008261:2957354:297034929703492970558210Clostridium perfringens ATCC 13124, complete genomeribosomal protein L293e-0960.5
NC_014829:133305:161055161055161258204Bacillus cellulosilyticus DSM 2522 chromosome, complete genomeribosomal protein L293e-0960.5
NC_010520:3788702:380322538032253803437213Clostridium botulinum A3 str. Loch Maree, complete genomeribosomal protein L294e-0960.1
NC_010516:3759136:377365937736593773871213Clostridium botulinum B1 str. Okra, complete genomeribosomal protein L294e-0960.1
NC_012563:3956500:397057039705703970782213Clostridium botulinum A2 str. Kyoto, complete genomeribosomal protein L294e-0960.1
NC_009495:3688138:370266137026613702873213Clostridium botulinum A str. ATCC 3502 chromosome, complete genome50S ribosomal protein L294e-0960.1
NC_009697:3659834:367865036786503678862213Clostridium botulinum A str. ATCC 19397 chromosome, complete50S ribosomal protein L294e-0960.1
NC_009698:3553365:357575935757593575971213Clostridium botulinum A str. Hall chromosome, complete genome50S ribosomal protein L294e-0960.1
NC_009699:3790917:380544038054403805652213Clostridium botulinum F str. Langeland chromosome, complete genome50S ribosomal protein L294e-0960.1
NC_012658:3778822:379334537933453793557213Clostridium botulinum Ba4 str. 657 chromosome, complete genome50S ribosomal protein L294e-0960.1
NC_017297:3787191:380405438040543804266213Clostridium botulinum F str. 230613 chromosome, complete genome50S ribosomal protein L294e-0960.1
NC_011999:198769:208053208053208277225Macrococcus caseolyticus JCSC5402, complete genome50S ribosomal protein L294e-0960.1
NC_014171:109280:132402132402132602201Bacillus thuringiensis BMB171 chromosome, complete genome50S ribosomal protein L29P6e-0959.7
NC_017208:108134:134451134451134651201Bacillus thuringiensis serovar chinensis CT-43 chromosome, complete50S ribosomal protein L296e-0959.7
NC_018704:124823:143151143151143351201Amphibacillus xylanus NBRC 15112, complete genome50S ribosomal protein L291e-0858.9
NC_009633:4563877:457330345733034573506204Alkaliphilus metalliredigens QYMF chromosome, complete genome50S ribosomal protein L291e-0858.5
NC_014220:2239594:225629222562922256498207Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomeribosomal protein L291e-0858.2
NC_019978:178277:202312202312202515204Halobacteroides halobius DSM 5150, complete genomeribosomal protein L292e-0857.8
NC_008555:2597980:260713826071382607329192Listeria welshimeri serovar 6b str. SLCC5334, complete genomeribosomal protein L292e-0857.8
NC_013406:6422000:642798164279816428178198Paenibacillus sp. Y412MC10 chromosome, complete genome50S ribosomal protein L292e-0857.8
NC_018664:2357882:237043723704372370640204Clostridium acidurici 9a chromosome, complete genome50S ribosomal protein L293e-0857
NC_015520:2280643:228286022828602283060201Mahella australiensis 50-1 BON chromosome, complete genome50S ribosomal protein L29P3e-0857
NC_014377:112992:132200132200132397198Thermosediminibacter oceani DSM 16646 chromosome, complete genomeLSU ribosomal protein L29P4e-0856.6
NC_004193:119737:145929145929146129201Oceanobacillus iheyensis HTE831, complete genome50S ribosomal protein L294e-0856.6
NC_015519:197836:218219218219218434216Tepidanaerobacter sp. Re1 chromosome, complete genome50S ribosomal protein L295e-0856.6
NC_009922:542500:563994563994564197204Alkaliphilus oremlandii OhILAs, complete genomeribosomal protein L296e-0856.2
NC_015601:1229909:123892312389231239126204Erysipelothrix rhusiopathiae str. Fujisawa, complete genome50S ribosomal protein L299e-0855.5
NC_016052:2274427:228223722822372282425189Tetragenococcus halophilus NBRC 12172, complete genome50S ribosomal protein L291e-0755.5
NC_007503:2063451:206907820690782069287210Carboxydothermus hydrogenoformans Z-2901, complete genomeribosomal protein L291e-0755.1
NC_015145:2994418:299516129951612995490330Arthrobacter phenanthrenivorans Sphe3 chromosome, complete genome50S ribosomal protein L29P2e-0754.3
NC_016938:136331:143723143723143914192Melissococcus plutonius DAT561 chromosome 1, complete genome50S ribosomal protein L29p2e-0754.3
NC_015516:131564:141843141843142034192Melissococcus plutonius ATCC 35311, complete genome50S ribosomal protein L29p (L35e)2e-0754.3
NC_013893:830282:840442840442840651210Staphylococcus lugdunensis HKU09-01 chromosome, complete genomeLSU ribosomal protein L29p (L35e)3e-0753.9
NC_009782:2362000:237495023749502375159210Staphylococcus aureus subsp. aureus Mu3, complete genome50S ribosomal protein L293e-0753.9
NC_002745:2289829:230381223038122304021210Staphylococcus aureus subsp. aureus N315, complete genome50S ribosomal protein L293e-0753.9
NC_002953:2282236:229432222943222294531210Staphylococcus aureus subsp. aureus MSSA476, complete genome50S ribosomal protein L293e-0753.9
NC_010079:2352691:236667423666742366883210Staphylococcus aureus subsp. aureus USA300_TCH1516, completeribosomal protein L293e-0753.9
NC_009487:2390713:240360724036072403816210Staphylococcus aureus subsp. aureus JH9 chromosome, complete50S ribosomal protein L293e-0753.9
NC_009632:2391397:240348324034832403692210Staphylococcus aureus subsp. aureus JH1 chromosome, complete50S ribosomal protein L293e-0753.9
NC_002758:2359329:237331223733122373521210Staphylococcus aureus subsp. aureus Mu50, complete genome50S ribosomal protein L293e-0753.9
NC_012121:1728913:174167217416721741881210Staphylococcus carnosus subsp. carnosus TM300, complete genome50S ribosomal protein L293e-0753.9
NC_004461:1849176:186256418625641862773210Staphylococcus epidermidis ATCC 12228, complete genome50S ribosomal protein L293e-0753.9
NC_007795:2299327:231331023133102313519210Staphylococcus aureus subsp. aureus NCTC 8325, complete genomeribosomal protein L293e-0753.9
NC_007622:2239799:225378022537802253989210Staphylococcus aureus RF122, complete genome50S ribosomal protein L293e-0753.9
NC_002976:1844901:185759418575941857803210Staphylococcus epidermidis RP62A, complete genomeribosomal protein L293e-0753.9
NC_002951:2288674:230265723026572302866210Staphylococcus aureus subsp. aureus COL, complete genomeribosomal protein L293e-0753.9
NC_020164:701151:712285712285712494210Staphylococcus warneri SG1, complete genome50S ribosomal protein L293e-0753.9
NC_002952:2390668:240275924027592402968210Staphylococcus aureus subsp. aureus MRSA252, complete genome50S ribosomal protein L293e-0753.9
NC_013450:2306431:232000223200022320211210Staphylococcus aureus subsp. aureus ED98, complete genome50S ribosomal protein L293e-0753.9
NC_016912:2170615:218459821845982184807210Staphylococcus aureus subsp. aureus VC40 chromosome, complete50S ribosomal protein L293e-0753.9
NC_007350:692041:703300703300703509210Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305,50S ribosomal protein L293e-0753.9
NC_007168:813957:824002824002824211210Staphylococcus haemolyticus JCSC1435, complete genome50S ribosomal protein L293e-0753.9
NC_020995:245671:257222257222257410189Enterococcus casseliflavus EC20, complete genome50S ribosomal protein L293e-0753.9
NC_009641:2357468:237103823710382371259222Staphylococcus aureus subsp. aureus str. Newman chromosome,50S ribosomal protein L293e-0753.9
NC_007793:2352953:236652423665242366745222Staphylococcus aureus subsp. aureus USA300, complete genome50S ribosomal protein L293e-0753.9
NC_003923:2301234:231521723152172315438222Staphylococcus aureus subsp. aureus MW2, complete genome50S ribosomal protein L293e-0753.9
NC_017353:825856:836016836016836225210Staphylococcus lugdunensis N920143, complete genome50S ribosomal protein L293e-0753.9
NC_017351:2335753:234973723497372349946210Staphylococcus aureus subsp. aureus 11819-97 chromosome, complete50S ribosomal protein L293e-0753.9
NC_017347:2350802:236478523647852364994210Staphylococcus aureus subsp. aureus T0131 chromosome, complete50S ribosomal protein L293e-0753.9
NC_016928:2249907:226347222634722263681210Staphylococcus aureus subsp. aureus M013 chromosome, complete50S ribosomal protein L293e-0753.9
NC_016941:2234937:224846222484622248671210Staphylococcus aureus subsp. aureus MSHR1132, complete genome50S ribosomal protein L293e-0753.9
NC_017337:2319847:233341723334172333626210Staphylococcus aureus subsp. aureus ED133 chromosome, complete50S ribosomal protein L293e-0753.9
NC_017338:2296906:230980023098002310009210Staphylococcus aureus subsp. aureus JKD6159 chromosome, complete50S ribosomal protein L293e-0753.9
NC_017341:2384736:239871923987192398928210Staphylococcus aureus subsp. aureus str. JKD6008 chromosome,50S ribosomal protein L293e-0753.9
NC_017342:1012555:102380510238051024014210Staphylococcus aureus subsp. aureus TCH60 chromosome, complete50S ribosomal protein L293e-0753.9
NC_017343:2212780:222676322267632226972210Staphylococcus aureus subsp. aureus ECT-R 2, complete genome50S ribosomal protein L293e-0753.9
NC_014925:1970500:197724119772411977450210Staphylococcus pseudintermedius HKU10-03 chromosome, completeLSU ribosomal protein L29p (L35e)4e-0753.5
NC_007929:1463295:149178014917801491974195Lactobacillus salivarius subsp. salivarius UCC118, complete genomeLSU ribosomal protein L29P5e-0753.1
NC_014614:2295131:230437423043742304571198Clostridium sticklandii, complete genome50S ribosomal subunit protein L296e-0752.8
NC_021177:4945878:496090449609044961128225Streptomyces fulvissimus DSM 40593, complete genome50S ribosomal protein L299e-0752.4
NC_015953:4385419:441003144100314410255225Streptomyces sp. SirexAA-E chromosome, complete genome50S ribosomal protein L299e-0752.4
NC_016114:2960989:297599929759992976223225Streptomyces flavogriseus ATCC 33331 chromosome, complete genome50S ribosomal protein L299e-0752.4
NC_018750:4728870:473929747392974739521225Streptomyces venezuelae ATCC 10712, complete genomeLSU ribosomal protein L29p8e-0752.4
NC_010572:3314500:332974533297453329969225Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative 50S ribosomal protein L298e-0752.4
NC_012803:1839809:185343718534371853706270Micrococcus luteus NCTC 2665, complete genomeLSU ribosomal protein L29P8e-0752.4
NC_004668:191732:203106203106203294189Enterococcus faecalis V583, complete genomeribosomal protein L298e-0752.4
NC_017316:157254:168073168073168261189Enterococcus faecalis OG1RF chromosome, complete genome50S ribosomal protein L298e-0752.4
NC_015391:2523451:254401525440152544209195Carnobacterium sp. 17-4 chromosome, complete genome50S ribosomal protein L291e-0652
NC_003888:5114147:513248451324845132708225Streptomyces coelicolor A3(2), complete genome50S ribosomal protein L291e-0652
NC_015957:690817:693587693587693811225Streptomyces violaceusniger Tu 4113 chromosome, complete genome50S ribosomal protein L291e-0652
NC_017096:1081904:109249810924981092701204Caldisericum exile AZM16c01, complete genome50S ribosomal protein L291e-0652
NC_003155:5987000:599200859920085992232225Streptomyces avermitilis MA-4680, complete genomeribosomal protein L291e-0652
NC_010163:63209:885348853488722189Acholeplasma laidlawii PG-8A chromosome, complete genome50S ribosomal protein L291e-0652
NC_015682:736746:750663750663750860198Thermodesulfobacterium sp. OPB45 chromosome, complete genome50S ribosomal protein L291e-0652
NC_015913:1491393:149863614986361498845210Candidatus Arthromitus sp. SFB-mouse-Japan, complete genome50S ribosomal protein L291e-0652
NC_017294:1457262:146502814650281465237210Candidatus Arthromitus sp. SFB-mouse-Yit, complete genome50S ribosomal protein L291e-0652
NC_016012:1380260:138843613884361388645210Candidatus Arthromitus sp. SFB-rat-Yit, complete genomeribosomal protein L291e-0651.6
NC_013223:2337049:234859823485982348801204Desulfohalobium retbaense DSM 5692, complete genomeribosomal protein L291e-0651.6
NC_013929:4136742:415496941549694155193225Streptomyces scabiei 87.22 chromosome, complete genome50S ribosomal protein L291e-0651.6
NC_010617:665830:680654680654680950297Kocuria rhizophila DC2201, complete genome50S ribosomal protein L292e-0651.2
NC_016111:3865823:387759538775953877819225Streptomyces cattleya NRRL 8057, complete genome50S ribosomal protein L292e-0651.2
NC_014165:597000:630983630983631219237Thermobispora bispora DSM 43833 chromosome, complete genome50S ribosomal protein L292e-0651.2
NC_015707:705628:725826725826726026201Thermotoga thermarum DSM 5069 chromosome, complete genome50S ribosomal protein L29P2e-0651.2
NC_016630:1462788:147036714703671470558192Filifactor alocis ATCC 35896 chromosome, complete genome50S ribosomal protein L292e-0650.8
NC_013939:1767262:178091617809161781122207Deferribacter desulfuricans SSM1, complete genome50S ribosomal protein L292e-0650.8
NC_015759:536929:549713549713549919207Weissella koreensis KACC 15510 chromosome, complete genome50S ribosomal protein L293e-0650.8
NC_014666:7641060:766061476606147660859246Frankia sp. EuI1c chromosome, complete genomeribosomal protein L293e-0650.4
NC_016629:2449731:245255824525582452752195Desulfovibrio africanus str. Walvis Bay chromosome, complete50S ribosomal protein L293e-0650.4
NC_016148:698388:701915701915702121207Thermovirga lienii DSM 17291 chromosome, complete genome50S ribosomal protein L294e-0650.1
NC_013517:4208939:422341542234154223606192Sebaldella termitidis ATCC 33386, complete genomeribosomal protein L295e-0649.7
NC_015977:3127500:313757531375753137784210Roseburia hominis A2-183 chromosome, complete genome50S ribosomal protein L296e-0649.7
NC_013316:81969:111053111053111256204Clostridium difficile R20291, complete genome50S ribosomal protein L296e-0649.3
NC_009089:87581:107306107306107509204Clostridium difficile 630, complete genome50S ribosomal protein L296e-0649.3
NC_009828:600349:613538613538613738201Thermotoga lettingae TMO, complete genomeribosomal protein L299e-0648.9