Pre_GI: BLASTP Hits

Some Help

Query: NC_009012:1901492:1920437 Clostridium thermocellum ATCC 27405, complete genome

Start: 1920437, End: 1920799, Length: 363

Host Lineage: Clostridium thermocellum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain is a well studied producer of endoglucanase and several restriction endonucleases. Thermophilic cellulose degrading bacterium. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. This organism is a thermophilic anaerobe that produces an extracellular enzyme system capable of degrading crystalline cellulose to soluble sugars that are further utilized as the carbon source for growth.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010337:2848360:286839428683942868753360Heliobacterium modesticaldum Ice1, complete genomehypothetical protein2e-33140
NC_016048:4047922:408420340842034084568366Oscillibacter valericigenes Sjm18-20, complete genomeputative regulatory protein2e-30130
NC_014721:508000:508094508094508459366Caldicellulosiruptor kristjanssonii 177R1B chromosome, completetranscriptional repressor, copy family3e-27120
NC_016627:4270949:428781542878154288177363Clostridium clariflavum DSM 19732 chromosome, complete genomeputative transcriptional regulator9e-26115
NC_010337:2848360:285662328566232856991369Heliobacterium modesticaldum Ice1, complete genometranscriptional repressor, copy family5e-25112
NC_016048:4163225:418094841809484181307360Oscillibacter valericigenes Sjm18-20, complete genomeBlaI family transcriptional regulator1e-0962
NC_013406:1145268:115358311535831153996414Paenibacillus sp. Y412MC10 chromosome, complete genometranscriptional repressor, CopY family5e-0959.7
NC_016627:4159406:416748441674844167876393Clostridium clariflavum DSM 19732 chromosome, complete genomeputative transcriptional regulator6e-0959.3
NC_016584:487613:503294503294503671378Desulfosporosinus orientis DSM 765 chromosome, complete genometranscriptional regulator1e-0755.5
NC_016584:138348:157084157084157467384Desulfosporosinus orientis DSM 765 chromosome, complete genometranscriptional regulator9e-0855.5
NC_015977:3215770:326572432657243266110387Roseburia hominis A2-183 chromosome, complete genomepenicillinase repressor1e-0755.1
NC_021184:207492:218971218971219144174Desulfotomaculum gibsoniae DSM 7213, complete genome1e-0755.1
NC_015690:2553837:255852025585202558909390Paenibacillus mucilaginosus KNP414 chromosome, complete genomepenicillinase repressor2e-0754.7
NC_016935:3103430:310804731080473108436390Paenibacillus mucilaginosus 3016 chromosome, complete genomepenicillinase repressor7e-0752.8
NC_014377:321949:325832325832326200369Thermosediminibacter oceani DSM 16646 chromosome, complete genometranscriptional repressor, CopY family1e-0652
NC_014376:3593500:359369135936913594074384Clostridium saccharolyticum WM1 chromosome, complete genometranscriptional repressor, CopY family1e-0651.6