Pre_GI: BLASTP Hits

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Query: NC_009012:1595498:1598423 Clostridium thermocellum ATCC 27405, complete genome

Start: 1598423, End: 1598659, Length: 237

Host Lineage: Clostridium thermocellum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain is a well studied producer of endoglucanase and several restriction endonucleases. Thermophilic cellulose degrading bacterium. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. This organism is a thermophilic anaerobe that produces an extracellular enzyme system capable of degrading crystalline cellulose to soluble sugars that are further utilized as the carbon source for growth.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016627:3205333:320691532069153207148234Clostridium clariflavum DSM 19732 chromosome, complete genomeDNA-directed RNA polymerase subunit omega5e-31132
NC_015873:1933036:193567519356751935884210Megasphaera elsdenii DSM 20460, complete genomeDNA-directed RNA polymerase subunit omega1e-1375.5
NC_020291:1389114:141116414111641411382219Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeDNA-directed RNA polymerase subunit omega1e-1271.6
NC_019970:1457794:146172214617221461931210Thermoanaerobacterium thermosaccharolyticum M0795, complete genomeDNA-directed RNA polymerase subunit omega8e-1269.3
NC_002570:2616899:263189226318922632098207Bacillus halodurans C-125, complete genomeDNA-directed RNA polymerase omega subunit8e-0959.3
NC_008555:1874878:187623118762311876434204Listeria welshimeri serovar 6b str. SLCC5334, complete genomeDNA-directed RNA polymerase, omega subunit1e-0652
NC_013768:1983711:198746319874631987669207Listeria monocytogenes 08-5923, complete genomehypothetical protein1e-0652
NC_002973:1877905:188165718816571881863207Listeria monocytogenes str. 4b F2365, complete genomeDNA-directed RNA polymerase, omega subunit1e-0652
NC_011660:724711:741738741738741941204Listeria monocytogenes HCC23 chromosome, complete genomeDNA-directed RNA polymerase subunit omega1e-0651.6