Pre_GI: BLASTP Hits

Some Help

Query: NC_008596:4196194:4216158 Mycobacterium smegmatis str. MC2 155, complete genome

Start: 4216158, End: 4216742, Length: 585

Host Lineage: Mycobacterium smegmatis; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Causes opportunistic infections. This genus comprises a number of Gram-positive, acid-fast, rod-shaped aerobic bacteria and is the only member of the family Mycobacteriaceae within the order Actinomycetales. Like other closely related Actinomycetales, such as Nocardia and Corynebacterium, mycobacteria have unusually high genomic DNA GC content and are capable of producing mycolic acids as major components of their cell wall. Mycobacterium smegmatis was initially isolated from human smegma. It is associated with soft tissue lesions following trauma or surgery. It is also reported as a possible factor in penile carcinogenesis.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013510:747042:769273769273770103831Thermomonospora curvata DSM 43183, complete genomeNAD-dependent epimerase/dehydratase3e-29127
NC_007005:6056765:606304560630456063770726Pseudomonas syringae pv. syringae B728a, complete genomedTDP-glucose 4,6-dehydratase6e-28123
NC_015381:3789661:380624638062463806971726Burkholderia gladioli BSR3 chromosome 1, complete sequenceDTDP-glucose 4,6-dehydratase1e-26119
NC_011146:3537546:354909635490963549833738Geobacter bemidjiensis Bem, complete genomeNAD-dependent epimerase/dehydratase5e-26117
NC_018750:6869675:687330968733096874148840Streptomyces venezuelae ATCC 10712, complete genomedTDP-glucose 4,6-dehydratase3e-2097.8
NC_013729:1556922:157686615768661577777912Kribbella flavida DSM 17836, complete genomeNAD-dependent epimerase/dehydratase7e-1993.6
NC_007777:2964500:298875829887582989669912Frankia sp. CcI3, complete genomeNAD-dependent epimerase/dehydratase7e-0753.5