Pre_GI: BLASTP Hits

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Query: NC_008595:5234467:5241967 Mycobacterium avium 104, complete genome

Start: 5241967, End: 5242413, Length: 447

Host Lineage: Mycobacterium avium; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: It was derived from an AIDS patient and has been characterized for virulence in the murine model of low-dose aerosol infection in that it could colonize the lung, proliferate within the tissue and disseminate to other organs. Environmental organism which causes infections in birds and humans. This genus comprises a number of Gram-positive, acid-fast, rod-shaped aerobic bacteria and is the only member of the family Mycobacteriaceae within the order Actinomycetales. Like other closely related Actinomycetales, such as Nocardia and Corynebacterium, Mycobacteria have unusually high genomic DNA GC content and are capable of producing mycolic acids as major components of their cell wall. Mycobacterium avium is ubiquitous in the environment, and can be found in stagnant waters and soils. This organism causes tuberculosis in birds and disseminated infections in immunocompromized humans (the elderly, children, and especially patients with AIDS). Infection results in a characteristic pulmonary disease which requires expensive drug therapy for successful treatment. Most prevalent colony morphotypes are smooth opaque, smooth transparent and rough, with the last two being the faster growers in vivo.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017904:1831071:183666118366611837302642Mycobacterium sp. MOTT36Y chromosome, complete genomeTetR family transcriptional regulator5e-54209
NC_018581:1718023:172542617254261726130705Gordonia sp. KTR9 chromosome, complete genomeTranscriptional regulator2e-34144
NC_015563:2656628:268139926813992682013615Delftia sp. Cs1-4 chromosome, complete genomeregulatory protein TetR2e-1374.3
NC_014831:1818968:182454118245411825230690Thermaerobacter marianensis DSM 12885 chromosome, complete genometranscriptional regulator, TetR family4e-0960.1
NC_015594:160848:165046165046165639594Sphingobium chlorophenolicum L-1 chromosome chromosome 2, completeregulatory protein TetR8e-0855.8
NC_008740:443274:492649492649493263615Marinobacter aquaeolei VT8, complete genometranscriptional regulator, TetR family1e-0755.5