Pre_GI: BLASTP Hits

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Query: NC_008595:2215244:2228526 Mycobacterium avium 104, complete genome

Start: 2228526, End: 2230199, Length: 1674

Host Lineage: Mycobacterium avium; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: It was derived from an AIDS patient and has been characterized for virulence in the murine model of low-dose aerosol infection in that it could colonize the lung, proliferate within the tissue and disseminate to other organs. Environmental organism which causes infections in birds and humans. This genus comprises a number of Gram-positive, acid-fast, rod-shaped aerobic bacteria and is the only member of the family Mycobacteriaceae within the order Actinomycetales. Like other closely related Actinomycetales, such as Nocardia and Corynebacterium, Mycobacteria have unusually high genomic DNA GC content and are capable of producing mycolic acids as major components of their cell wall. Mycobacterium avium is ubiquitous in the environment, and can be found in stagnant waters and soils. This organism causes tuberculosis in birds and disseminated infections in immunocompromized humans (the elderly, children, and especially patients with AIDS). Infection results in a characteristic pulmonary disease which requires expensive drug therapy for successful treatment. Most prevalent colony morphotypes are smooth opaque, smooth transparent and rough, with the last two being the faster growers in vivo.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015731:3658956:3666161366616136678101650Nitrosomonas sp. Is79A3 chromosome, complete genomeEco57I restriction endonuclease0808
NC_009484:2660048:2671762267176226733571596Acidiphilium cryptum JF-5 chromosome, complete genomesite-specific DNA-methyltransferase (adenine-specific)1e-150533
NC_009767:2866668:2876810287681028783901581Roseiflexus castenholzii DSM 13941, complete genomeSite-specific DNA-methyltransferase (adenine-specific)6e-147521
NC_015677:1:6148614877311584Ramlibacter tataouinensis TTB310 chromosome, complete genomerestriction-modification system, putative endonuclease1e-140500
NC_010831:788500:7922527922527938441593Chlorobium phaeobacteroides BS1, complete genomeSite-specific DNA-methyltransferase (adenine-specific)5e-138491
NC_015703:4417342:4427772442777244292921521Runella slithyformis DSM 19594 chromosome, complete genomeadenine-specific DNA-methyltransferase3e-128459
NC_009943:1043210:1056071105607110576151545Candidatus Desulfococcus oleovorans Hxd3, complete genomeSite-specific DNA-methyltransferase (adenine-specific)8e-125447
NC_014814:859124:8985558985559002221668Mycobacterium sp. Spyr1 chromosome, complete genomeEco57I restriction endonuclease1e-85317
NC_014638:1043854:106105410610541062034981Bifidobacterium bifidum PRL2010 chromosome, complete genometype III restriction system endonuclease3e-59229
NC_014638:1043854:106211010621101062586477Bifidobacterium bifidum PRL2010 chromosome, complete genomesite-specific DNA-methyltransferase (adenine-specific)1e-36154
NC_014727:1071773:1078503107850310829394437Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,DNA or RNA helicase of superfamily ii2e-29131
NC_015436:202384:2072042072042114604257Spirochaeta coccoides DSM 17374 chromosome, complete genomehelicase A859L1e-27125
NC_008699:1673181:1689702168970216907571056Nocardioides sp. JS614, complete genomeEco57I restriction endonuclease6e-25116
NC_015737:831792:8405548405548415881035Clostridium sp. SY8519, complete genomehypothetical protein2e-23110
NC_015514:33972:4762647626486781053Cellulomonas fimi ATCC 484 chromosome, complete genomeEco57I restriction endonuclease4e-23109
NC_015514:33972:4426844268476243357Cellulomonas fimi ATCC 484 chromosome, complete genometype III restriction protein res subunit2e-0654.7