Pre_GI: BLASTP Hits

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Query: NC_008595:2215244:2217856 Mycobacterium avium 104, complete genome

Start: 2217856, End: 2218425, Length: 570

Host Lineage: Mycobacterium avium; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: It was derived from an AIDS patient and has been characterized for virulence in the murine model of low-dose aerosol infection in that it could colonize the lung, proliferate within the tissue and disseminate to other organs. Environmental organism which causes infections in birds and humans. This genus comprises a number of Gram-positive, acid-fast, rod-shaped aerobic bacteria and is the only member of the family Mycobacteriaceae within the order Actinomycetales. Like other closely related Actinomycetales, such as Nocardia and Corynebacterium, Mycobacteria have unusually high genomic DNA GC content and are capable of producing mycolic acids as major components of their cell wall. Mycobacterium avium is ubiquitous in the environment, and can be found in stagnant waters and soils. This organism causes tuberculosis in birds and disseminated infections in immunocompromized humans (the elderly, children, and especially patients with AIDS). Infection results in a characteristic pulmonary disease which requires expensive drug therapy for successful treatment. Most prevalent colony morphotypes are smooth opaque, smooth transparent and rough, with the last two being the faster growers in vivo.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009380:3903392:390735439073543908001648Salinispora tropica CNB-440 chromosome, complete genomecupin9e-35146
NC_014815:3790050:379301037930103793594585Micromonospora sp. L5 chromosome, complete genomehelix-turn-helix domain protein7e-33140
NC_013235:464049:465497465497466090594Nakamurella multipartita DSM 44233, complete genometranscriptional regulator, XRE family6e-31133
NC_015434:3507059:352202535220253522603579Verrucosispora maris AB-18-032 chromosome, complete genomeXRE family transcriptional regulator3e-30131
NC_018524:301992:319448319448320035588Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomehelix-turn-helix family protein1e-28125
NC_013521:345308:370775370775371347573Sanguibacter keddieii DSM 10542, complete genomepredicted transcriptional regulator8e-27119
NC_013729:2258582:225858222585822259178597Kribbella flavida DSM 17836, complete genometranscriptional regulator, XRE family1e-22106
NC_008148:2498000:252032625203262520988663Rubrobacter xylanophilus DSM 9941, complete genometranscriptional regulator, XRE family with cupin sensor4e-1167.8
NC_017273:352150:357368357368357946579Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, completecupin3e-1064.7
NC_012108:946314:962372962372962944573Desulfobacterium autotrophicum HRM2, complete genometranscriptional regulator (Cro/CI family protein)2e-0962.4
NC_016025:552000:561697561697562284588Candidatus Chloracidobacterium thermophilum B chromosome chromosomeputative transcriptional regulator2e-0962
NC_014831:1843835:186641118664111867175765Thermaerobacter marianensis DSM 12885 chromosome, complete genomeCupin 2 conserved barrel domain protein4e-0961.2
NC_014118:2417838:242979424297942430366573Burkholderia sp. CCGE1002 chromosome chromosome 2, completetranscriptional regulator, XRE family3e-0961.2
NC_016048:3856665:387693238769323877567636Oscillibacter valericigenes Sjm18-20, complete genomeputative Xre family DNA-binding protein5e-0857.4
NC_015500:900807:900807900807901394588Treponema brennaborense DSM 12168 chromosome, complete genomehelix-turn-helix domain protein3e-0755.1
NC_015723:2116090:211951321195132120103591Cupriavidus necator N-1 chromosome 2, complete sequenceN-carbamoyl-L-amino acid hydrolase AmaB4e-0754.3
NC_015727:764744:769843769843770589747Cupriavidus necator N-1 plasmid BB1p, complete sequenceCro/CI family transcriptional regulator protein7e-0753.5
NC_010175:2925084:294094629409462941581636Chloroflexus aurantiacus J-10-fl, complete genomeCupin 2 conserved barrel domain protein2e-0652.4
NC_012032:2925000:293613129361312936766636Chloroflexus sp. Y-400-fl, complete genometranscriptional regulator, XRE family2e-0652.4
NC_013947:4363250:437654343765434377166624Stackebrandtia nassauensis DSM 44728 chromosome, complete genometranscriptional regulator, XRE family2e-0652
NC_010511:4313769:431666343166634317268606Methylobacterium sp. 4-46 chromosome, complete genomeXRE family transcriptional regulator2e-0652
NC_014640:5047201:504847650484765049030555Achromobacter xylosoxidans A8 chromosome, complete genomehypothetical protein3e-0651.6