Pre_GI: BLASTP Hits

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Query: NC_008595:1349579:1368283 Mycobacterium avium 104, complete genome

Start: 1368283, End: 1368876, Length: 594

Host Lineage: Mycobacterium avium; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: It was derived from an AIDS patient and has been characterized for virulence in the murine model of low-dose aerosol infection in that it could colonize the lung, proliferate within the tissue and disseminate to other organs. Environmental organism which causes infections in birds and humans. This genus comprises a number of Gram-positive, acid-fast, rod-shaped aerobic bacteria and is the only member of the family Mycobacteriaceae within the order Actinomycetales. Like other closely related Actinomycetales, such as Nocardia and Corynebacterium, Mycobacteria have unusually high genomic DNA GC content and are capable of producing mycolic acids as major components of their cell wall. Mycobacterium avium is ubiquitous in the environment, and can be found in stagnant waters and soils. This organism causes tuberculosis in birds and disseminated infections in immunocompromized humans (the elderly, children, and especially patients with AIDS). Infection results in a characteristic pulmonary disease which requires expensive drug therapy for successful treatment. Most prevalent colony morphotypes are smooth opaque, smooth transparent and rough, with the last two being the faster growers in vivo.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016947:1311264:131422113142211314802582Mycobacterium intracellulare MOTT-02 chromosome, complete genomeTetR family transcriptional regulator1e-73275
NC_016113:803268:819821819821820408588Streptomyces cattleya NRRL 8057 plasmid pSCAT, complete sequenceTetR-family protein transcriptional regulator2e-0755.8
NC_017506:1:489024890249600699Marinobacter adhaerens HP15 chromosome, complete genomeDitK protein7e-0753.9
NC_009338:4913510:492328449232844923877594Mycobacterium gilvum PYR-GCK chromosome, complete genomeTetR family transcriptional regulator2e-0652.8
NC_007492:3462929:349938234993823500011630Pseudomonas fluorescens PfO-1, complete genomeTranscriptional Regulator, TetR family2e-0652.4
NC_014500:2402881:242317224231722423798627Dickeya dadantii 3937 chromosome, complete genomeputative DNA-binding transcriptional regulatory family of the TetR family2e-0652.4
NC_013947:3406000:341000834100083410583576Stackebrandtia nassauensis DSM 44728 chromosome, complete genometranscriptional regulator, TetR family2e-0652
NC_018691:1322389:132622213262221326935714Alcanivorax dieselolei B5 chromosome, complete genometranscriptional regulator, TetR family protein5e-0650.8
NC_016111:1:268526853368684Streptomyces cattleya NRRL 8057, complete genomeTetR-family transcriptional regulator7e-0650.4
NC_009785:1534454:155097315509731551539567Streptococcus gordonii str. Challis substr. CH1, complete genometranscription regulator (TetR/AcrR family) BH0580, putative9e-0650.1