Pre_GI: BLASTP Hits

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Query: NC_008593:980731:1002469 Clostridium novyi NT, complete genome

Start: 1002469, End: 1003953, Length: 1485

Host Lineage: Clostridium novyi; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain (NT) was created so that it lacks the lethal toxin. Injection of spores of this organism into mice harboring tumors resulted in an increased immune response and destruction of the tumor tissue in a method known as COBALT (combination bacteriolytic therapy) when the spores along with chemotherapeutic agents or radiation are co-administered. The anaerobic bacteria preferentially target hypoxic cancer tissue and stimulate immune responses to that tissue. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. Clostridium novyi is an anaerobic bacterium found in soil, aquatic sediments, and intestinal tract of both animals and humans. Some types produce lethal toxins.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015954:1739789:1759063175906317606221560Halophilic archaeon DL31 chromosome, complete genomehypothetical protein6e-1995.9
NC_009767:997500:1006495100649510079341440Roseiflexus castenholzii DSM 13941, complete genomehypothetical protein2e-1790.9
NC_014032:825793:8540098540098554181410Salinibacter ruber M8 chromosome, complete genomehypothetical protein3e-1790.1
NC_007645:5397526:5411408541140854127451338Hahella chejuensis KCTC 2396, complete genomehypothetical protein3e-1480.5
NC_014624:2478985:2492265249226524936771413Eubacterium limosum KIST612 chromosome, complete genomehypothetical protein1e-0758.2
NC_013204:2234860:2247501224750122490151515Eggerthella lenta DSM 2243, complete genomeCapsule polysaccharide biosynthesis protein1e-0655.1