Pre_GI: BLASTP Hits

Some Help

Query: NC_008593:2020473:2040892 Clostridium novyi NT, complete genome

Start: 2040892, End: 2042208, Length: 1317

Host Lineage: Clostridium novyi; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain (NT) was created so that it lacks the lethal toxin. Injection of spores of this organism into mice harboring tumors resulted in an increased immune response and destruction of the tumor tissue in a method known as COBALT (combination bacteriolytic therapy) when the spores along with chemotherapeutic agents or radiation are co-administered. The anaerobic bacteria preferentially target hypoxic cancer tissue and stimulate immune responses to that tissue. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. Clostridium novyi is an anaerobic bacterium found in soil, aquatic sediments, and intestinal tract of both animals and humans. Some types produce lethal toxins.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015425:2277570:2294149229414922953271179Clostridium botulinum BKT015925 chromosome, complete genomemetallo-beta-lactamase superfamily protein4e-148525
NC_015425:1295261:1327851132785113291431293Clostridium botulinum BKT015925 chromosome, complete genomemetallo beta-lactamase superfamily hydrolase4e-98358
NC_015555:863173:879509879509880426918Thermoanaerobacterium xylanolyticum LX-11 chromosome, completebeta-lactamase domain protein7e-86318
NC_019970:1991944:199194419919441992897954Thermoanaerobacterium thermosaccharolyticum M0795, complete genomeputative hydrolase (metallo-beta-lactamase superfamily)1e-85317
NC_007644:1293701:1297449129744912984951047Moorella thermoacetica ATCC 39073, complete genomeBeta-lactamase-like2e-75283
NC_015573:893862:9200839200839212731191Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomehypothetical protein3e-75282
NC_015425:2024154:202906720290672029936870Clostridium botulinum BKT015925 chromosome, complete genomecomE-like protein, metallo beta-lactamase superfamily hydrolase4e-71269
NC_011837:950000:975137975137976012876Clostridium kluyveri NBRC 12016, complete genomehypothetical protein6e-71268
NC_012658:482313:496519496519497382864Clostridium botulinum Ba4 str. 657 chromosome, complete genomemetallo-beta-lactamase family protein3e-68259
NC_018870:2316499:2317535231753523185451011Thermacetogenium phaeum DSM 12270 chromosome, complete genomebeta-lactamase-like protein7e-67254
NC_010520:496500:508756508756509619864Clostridium botulinum A3 str. Loch Maree, complete genomemetallo-beta-lactamase family protein3e-66253
NC_010516:514000:525978525978526841864Clostridium botulinum B1 str. Okra, complete genomemetallo-beta-lactamase family protein2e-66253
NC_009699:490652:505688505688506551864Clostridium botulinum F str. Langeland chromosome, complete genomemetallo-beta-lactamase family protein2e-66253
NC_017297:490922:505958505958506821864Clostridium botulinum F str. 230613 chromosome, complete genomemetallo-beta-lactamase family protein2e-66253
NC_009495:482500:494523494523495386864Clostridium botulinum A str. ATCC 3502 chromosome, complete genomemetallo beta-lactamase superfamily lipoprotein4e-66252
NC_014328:711842:724612724612725472861Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative ComE-like protein4e-66252
NC_012563:519037:533717533717534580864Clostridium botulinum A2 str. Kyoto, complete genomemetallo-beta-lactamase family protein5e-66251
NC_009698:467500:479686479686480549864Clostridium botulinum A str. Hall chromosome, complete genomemetallo-beta-lactamase6e-64245
NC_009697:444801:459298459298460161864Clostridium botulinum A str. ATCC 19397 chromosome, completemetallo-beta-lactamase family protein6e-64245
NC_014721:2135500:2151860215186021529211062Caldicellulosiruptor kristjanssonii 177R1B chromosome, completehypothetical protein4e-62239
NC_021182:3409199:341020734102073411133927Clostridium pasteurianum BC1, complete genomeputative hydrolase (metallo-beta-lactamase superfamily)2e-60233
NC_018876:2189798:219092721909272191892966Methanolobus psychrophilus R15 chromosome, complete genomecompetence-like protein4e-55215
NC_004557:558500:570458570458571333876Clostridium tetani E88, complete genomecomE operon protein8e-53207
NC_003901:3698164:3698164369816436995791416Methanosarcina mazei Go1, complete genomecompetence-like protein5e-52205
NC_009633:3055413:309597330959733096854882Alkaliphilus metalliredigens QYMF chromosome, complete genomebeta-lactamase domain-containing protein2e-51203
NC_015873:2294312:230892823089282309860933Megasphaera elsdenii DSM 20460, complete genomemetallo-beta-lactamase family protein3e-51202
NC_014393:3425694:343246234324623433316855Clostridium cellulovorans 743B chromosome, complete genomeComE operon protein2e-49196
NC_019977:2307000:2308144230814423094961353Methanomethylovorans hollandica DSM 15978, complete genomeputative hydrolase (metallo-beta-lactamase superfamily)2e-49196
NC_020389:1730376:1737540173754017391111572Methanosarcina mazei Tuc01, complete genomehypothetical protein5e-46185
NC_002608:268000:2835292835292849681440Halobacterium sp. NRC-1 plasmid pNRC200, complete sequenceComA3e-45182
NC_017098:1542284:1565132156513215661661035Spirochaeta africana DSM 8902 chromosome, complete genomeputative hydrolase8e-45181
NC_015711:8852850:8852850885285088540461197Myxococcus fulvus HW-1 chromosome, complete genomemetallo-beta-lactamase family protein1e-42174
NC_011959:1965158:198185419818541982735882Thermomicrobium roseum DSM 5159, complete genomeComE operon protein 32e-39163
NC_012029:1865518:1872857187285718742901434Halorubrum lacusprofundi ATCC 49239 chromosome 1, complete genomebeta-lactamase domain protein6e-37155
NC_015711:8852850:8854043885404388553711329Myxococcus fulvus HW-1 chromosome, complete genomemetallo-beta-lactamase family protein1e-35151
NC_015519:1113095:1131445113144511337902346Tepidanaerobacter sp. Re1 chromosome, complete genomeDNA internalization-related competence protein ComEC/Rec23e-34146
NC_017098:840492:842582842582843433852Spirochaeta africana DSM 8902 chromosome, complete genomeputative hydrolase7e-33142
NC_011772:4255161:4275374427537442776952322Bacillus cereus G9842, complete genomeDNA internalization-related competence protein ComEC/Rec21e-32141
NC_017208:4294341:4314574431457443168952322Bacillus thuringiensis serovar chinensis CT-43 chromosome, completeComE operon protein 31e-32141
NC_010718:1229355:1242334124233412445862253Natranaerobius thermophilus JW/NM-WN-LF, complete genomeDNA internalization-related competence protein ComEC/Rec21e-32140
NC_004722:4244730:4264966426496642672872322Bacillus cereus ATCC 14579, complete genomeComE operon protein 39e-31135
NC_011725:4288309:4308540430854043108612322Bacillus cereus B4264 chromosome, complete genomeDNA internalization-related competence protein ComEC/Rec21e-30134
NC_014220:1732254:1732254173225417346382385Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomeDNA internalization-related competence protein ComEC/Rec24e-30132
NC_014958:843456:8584288584288606592232Deinococcus maricopensis DSM 21211 chromosome, complete genomeDNA internalization-like competence protein ComEC/Rec22e-29130
NC_010424:697187:750359750359751183825Candidatus Desulforudis audaxviator MP104C, complete genomehypothetical protein2e-25117
NC_014328:3682000:369688736968873697711825Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative hydrolase2e-25117
NC_014972:2659388:2662774266277426653262553Desulfobulbus propionicus DSM 2032 chromosome, complete genomeDNA internalization-like competence protein ComEC/Rec24e-23109
NC_010617:1467000:1470227147022714729682742Kocuria rhizophila DC2201, complete genomeputative ComEC/Rec2-related protein2e-22107
NC_014833:2988814:300242730024273003290864Ruminococcus albus 7 chromosome, complete genomemetallo-beta-lactamase superfamily exported protein6e-22105
NC_014221:591785:6059306059306083202391Truepera radiovictrix DSM 17093 chromosome, complete genomeDNA internalization-related competence protein ComEC/Rec21e-21104
NC_010120:662969:6740406740406762592220Neisseria meningitidis 053442, complete genomecompetence protein3e-20100
NC_017501:1633436:1639389163938916414642076Neisseria meningitidis 8013, complete genomecompetence protein ComA2e-20100
NC_015733:1680500:1700973170097317031052133Pseudomonas putida S16 chromosome, complete genomeacetyltransferase2e-20100
NC_017514:1520245:1523329152332915254042076Neisseria meningitidis M01-240149 chromosome, complete genomeDNA internalization-related competence protein ComEC/Rec22e-20100
NC_017505:721395:7354557354557377372283Neisseria meningitidis alpha710 chromosome, complete genomecompetence protein3e-2099.8
NC_017518:795113:8091728091728114542283Neisseria meningitidis NZ-05/33 chromosome, complete genomeDNA internalization-related competence protein ComEC/Rec24e-2099.8
NC_017517:749031:7641167641167661912076Neisseria meningitidis M01-240355 chromosome, complete genomeDNA internalization-related competence protein ComEC/Rec29e-2098.6
NC_003116:867943:8816518816518837262076Neisseria meningitidis Z2491, complete genomecompetence protein1e-1998.2
NC_017512:642229:6522936522936545752283Neisseria meningitidis WUE 2594, complete genomeCompetence protein comA2e-1997.8
NC_003112:719490:7325667325667346412076Neisseria meningitidis MC58, complete genomecompetence protein ComA2e-1997.8
NC_017515:1555500:1558623155862315609052283Neisseria meningitidis M04-240196 chromosome, complete genomeDNA internalization-related competence protein ComEC/Rec22e-1997.4
NC_013016:633313:6440126440126462942283Neisseria meningitidis alpha14 chromosome, complete genomecompetence protein ComA2e-1997.4
NC_014394:1815638:1836295183629518386552361Gallionella capsiferriformans ES-2 chromosome, complete genomeDNA internalization-related competence protein ComEC/Rec23e-1789.7
NC_011186:515214:5323295323295344642136Vibrio fischeri MJ11 chromosome II, complete sequenceDNA internalization-related competence protein ComEC/Rec28e-1788.6
NC_021182:554000:554135554135554281147Clostridium pasteurianum BC1, complete genome3e-1687
NC_012660:4149487:4169211416921141714362226Pseudomonas fluorescens SBW25 chromosome, complete genomehypothetical protein1e-1584.7
NC_008700:1627401:1627401162740116296982298Shewanella amazonensis SB2B, complete genomeDNA internalization-related competence protein ComEC/Rec23e-1583.6
NC_016147:1788219:1789291178929117919602670Pseudoxanthomonas spadix BD-a59 chromosome, complete genomecompetence-related DNA-transformation transporter2e-1480.9
NC_016616:2997348:304372930437293044514786Dechlorosoma suillum PS chromosome, complete genome3e-1376.6
NC_010531:428000:438851438851439660810Polynucleobacter necessarius STIR1, complete genomeDNA internalization-related competence protein ComEC/Rec23e-1273.6
NC_007633:952728:9576229576229596882067Mycoplasma capricolum subsp. capricolum ATCC 27343, completemetallo-beta-lactamase superfamily protein, putative5e-1272.8
NC_010939:896500:9179919179919202852295Actinobacillus pleuropneumoniae serovar 7 str. AP76, completerecombination protein 27e-1272
NC_014751:946155:9510829510829529111830Mycoplasma leachii PG50 chromosome, complete genomemetallo-beta-lactamase family protein3e-1170.5
NC_011884:1413831:141868214186821419674993Cyanothece sp. PCC 7425, complete genomebeta-lactamase domain protein7e-1168.9
NC_014019:2711500:2728639272863927298171179Bacillus megaterium QM B1551 chromosome, complete genomehypothetical protein6e-1065.9
NC_008261:1787345:1789859178985917917391881Clostridium perfringens ATCC 13124, complete genomemetallo-beta-lactamase family protein8e-0962
NC_015675:6651899:666173466617346662183450Mesorhizobium opportunistum WSM2075 chromosome, complete genome1e-0861.6
NC_002678:341996:350305350305351066762Mesorhizobium loti MAFF303099, complete genomesuccinoglycan biosynthesis protein exoI3e-0860.1
NC_007645:5160133:5177561517756151786521092Hahella chejuensis KCTC 2396, complete genomepredicted hydrolase (metallo-beta-lactamase superfamily)4e-0756.6
NC_015312:5783366:578481057848105785736927Pseudonocardia dioxanivorans CB1190 chromosome, complete genome50S ribosomal protein L4/L1e4e-0756.2
NC_004557:1141558:115744911574491157922474Clostridium tetani E88, complete genomemembrane spanning protein6e-0755.8
NC_006672:6000:179841798418802819Gluconobacter oxydans 621H plasmid pGOX1, complete sequencehypothetical protein4e-0653.1
NC_008054:1649160:165296116529611653350390Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, completehypothetical protein5e-0652.8