Pre_GI: BLASTP Hits

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Query: NC_008593:2020473:2040571 Clostridium novyi NT, complete genome

Start: 2040571, End: 2040738, Length: 168

Host Lineage: Clostridium novyi; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain (NT) was created so that it lacks the lethal toxin. Injection of spores of this organism into mice harboring tumors resulted in an increased immune response and destruction of the tumor tissue in a method known as COBALT (combination bacteriolytic therapy) when the spores along with chemotherapeutic agents or radiation are co-administered. The anaerobic bacteria preferentially target hypoxic cancer tissue and stimulate immune responses to that tissue. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. Clostridium novyi is an anaerobic bacterium found in soil, aquatic sediments, and intestinal tract of both animals and humans. Some types produce lethal toxins.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015425:2277570:229381922938192293977159Clostridium botulinum BKT015925 chromosome, complete genomehypothetical protein7e-1579.3
NC_009617:1255762:125986112598611260028168Clostridium beijerinckii NCIMB 8052 chromosome, complete genomehypothetical protein7e-1475.9
NC_009617:4761000:477577747757774775932156Clostridium beijerinckii NCIMB 8052 chromosome, complete genomehypothetical protein9e-1475.5
NC_010723:1084000:108636510863651086520156Clostridium botulinum E3 str. Alaska E43, complete genomehypothetical protein6e-1372.8
NC_010674:1124431:112526211252621125417156Clostridium botulinum B str. Eklund 17B, complete genomehypothetical protein6e-1372.8
NC_010516:3545017:354645335464533546623171Clostridium botulinum B1 str. Okra, complete genomehypothetical protein7e-1372.8
NC_020291:1810527:181510518151051815257153Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomezinc-binding domain-containing protein3e-1270.5
NC_010723:1465097:149414114941411494293153Clostridium botulinum E3 str. Alaska E43, complete genomehypothetical protein3e-1270.5
NC_010723:2231834:224760722476072247762156Clostridium botulinum E3 str. Alaska E43, complete genomehypothetical protein1e-1168.6
NC_010674:2435241:245035024503502450505156Clostridium botulinum B str. Eklund 17B, complete genomehypothetical protein1e-1168.6
NC_015519:924000:931273931273931581309Tepidanaerobacter sp. Re1 chromosome, complete genomehypothetical protein2e-1167.8
NC_014410:2149886:217140321714032171597195Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,hypothetical protein2e-1167.8
NC_009523:2769154:278623227862322786621390Roseiflexus sp. RS-1 chromosome, complete genomehypothetical protein1e-1065.5
NC_016048:797762:821339821339821650312Oscillibacter valericigenes Sjm18-20, complete genomehypothetical protein2e-1064.7
NC_014377:1546124:155074215507421551047306Thermosediminibacter oceani DSM 16646 chromosome, complete genomehypothetical protein3e-1063.9
NC_007644:362000:374298374298374618321Moorella thermoacetica ATCC 39073, complete genomehypothetical protein6e-1062.8
NC_016048:1390463:140120914012091401508300Oscillibacter valericigenes Sjm18-20, complete genomehypothetical protein2e-0961.2
NC_016048:1390463:141041914104191410703285Oscillibacter valericigenes Sjm18-20, complete genomehypothetical protein9e-0958.9
NC_014314:238043:274975274975275256282Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, completehypothetical protein4e-0856.6