Pre_GI: BLASTP Hits

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Query: NC_008593:2020473:2026397 Clostridium novyi NT, complete genome

Start: 2026397, End: 2026882, Length: 486

Host Lineage: Clostridium novyi; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain (NT) was created so that it lacks the lethal toxin. Injection of spores of this organism into mice harboring tumors resulted in an increased immune response and destruction of the tumor tissue in a method known as COBALT (combination bacteriolytic therapy) when the spores along with chemotherapeutic agents or radiation are co-administered. The anaerobic bacteria preferentially target hypoxic cancer tissue and stimulate immune responses to that tissue. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. Clostridium novyi is an anaerobic bacterium found in soil, aquatic sediments, and intestinal tract of both animals and humans. Some types produce lethal toxins.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015425:2277570:227757022775702278052483Clostridium botulinum BKT015925 chromosome, complete genomecitrulline cluster-linked protein2e-61234
NC_014614:260782:279379279379279864486Clostridium sticklandii, complete genomeCitrulline cluster-linked gene1e-41168
NC_011297:1296968:131588313158831316356474Dictyoglomus thermophilum H-6-12, complete genometransporter1e-27122
NC_019978:686362:703728703728704204477Halobacteroides halobius DSM 5150, complete genomehypothetical protein2e-22104
NC_014654:1529500:153184615318461532295450Halanaerobium sp. 'sapolanicus' chromosome, complete genomeprotein of unknown function DUF9886e-22103
NC_009922:42696:567755677557257483Alkaliphilus oremlandii OhILAs, complete genomeprotein of unknown function DUF9885e-21100
NC_012467:916000:933548933548934057510Streptococcus pneumoniae P1031, complete genomecitrulline cluster-linked protein1e-1995.5
NC_004557:2475030:247829124782912478815525Clostridium tetani E88, complete genometransporter8e-1889.4
NC_004193:375416:467140467140467622483Oceanobacillus iheyensis HTE831, complete genomecitrulline related protein2e-1685.1
NC_012778:1946924:196424619642461964740495Eubacterium eligens ATCC 27750, complete genomehypothetical protein4e-1477
NC_013198:2088780:211030721103072110807501Lactobacillus rhamnosus GG, complete genomeconserved hypothetical protein (integral membrane protein by homology)2e-1374.7
NC_013199:2058857:208128920812892081789501Lactobacillus rhamnosus Lc 705, complete genomeconserved hypothetical protein (integral membrane protein by homology)2e-1374.7
NC_010999:2155714:217471521747152175215501Lactobacillus casei, complete genomeCitrulline cluster-linked2e-1168.6
NC_014334:1954333:197509019750901975590501Lactobacillus casei str. Zhang chromosome, complete genomehypothetical protein2e-1168.6
NC_005957:1549201:156871415687141569199486Bacillus thuringiensis serovar konkukian str. 97-27, completehypothetical protein5e-1167
NC_006274:1547819:156733215673321567817486Bacillus cereus E33L, complete genomehypothetical protein5e-1167
NC_011773:1590560:161007316100731610558486Bacillus cereus AH820 chromosome, complete genomehypothetical protein5e-1167
NC_005945:1523014:154252715425271543012486Bacillus anthracis str. Sterne, complete genomehypothetical protein5e-1167
NC_007530:1523060:154257315425731543058486Bacillus anthracis str. 'Ames Ancestor', complete genomehypothetical protein5e-1167
NC_003997:1522937:154245015424501542935486Bacillus anthracis str. Ames, complete genomehypothetical protein5e-1167
NC_012659:1522960:154247315424731542958486Bacillus anthracis str. A0248, complete genomehypothetical protein5e-1167
NC_016894:77853:100002100002100502501Acetobacterium woodii DSM 1030 chromosome, complete genomehypothetical protein3e-1064.3
NC_010001:109893:127890127890128408519Clostridium phytofermentans ISDg, complete genomeprotein of unknown function DUF9881e-0962.4