Pre_GI: BLASTP Hits

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Query: NC_008593:1917118:1945599 Clostridium novyi NT, complete genome

Start: 1945599, End: 1946033, Length: 435

Host Lineage: Clostridium novyi; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain (NT) was created so that it lacks the lethal toxin. Injection of spores of this organism into mice harboring tumors resulted in an increased immune response and destruction of the tumor tissue in a method known as COBALT (combination bacteriolytic therapy) when the spores along with chemotherapeutic agents or radiation are co-administered. The anaerobic bacteria preferentially target hypoxic cancer tissue and stimulate immune responses to that tissue. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. Clostridium novyi is an anaerobic bacterium found in soil, aquatic sediments, and intestinal tract of both animals and humans. Some types produce lethal toxins.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010003:1724500:173860817386081739543936Petrotoga mobilis SJ95, complete genomePrephenate dehydratase6e-1166.2
NC_013156:226215:243275243275244084810Methanocaldococcus fervens AG86, complete genomeprephenate dehydratase2e-0858.2
NC_019771:2816732:282031328203132821185873Anabaena cylindrica PCC 7122, complete genomeprephenate dehydratase4e-0857
NC_015682:1457004:1474754147475414758301077Thermodesulfobacterium sp. OPB45 chromosome, complete genomeprephenate dehydratase6e-0856.2
NC_015573:2323268:2345906234590623471711266Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomePrephenate dehydratase1e-0755.5
NC_014408:1455851:147659814765981477419822Methanothermobacter marburgensis str. Marburg chromosome, completeprephenate dehydratase3e-0753.9
NC_020419:977778:9892419892419903201080Uncultured Termite group 1 bacterium phylotype Rs-D17 DNA, completechorismate mutase/prephenate dehydratase4e-0753.5
NC_020419:782337:7925547925547936331080Uncultured Termite group 1 bacterium phylotype Rs-D17 DNA, completechorismate mutase/prephenate dehydratase4e-0753.5
NS_000191:977778:9892419892419903201080Uncultured Termite group 1 bacterium phylotype Rs-D17, completechorismate mutase/prephenate dehydratase4e-0753.5
NS_000191:782337:7925547925547936331080Uncultured Termite group 1 bacterium phylotype Rs-D17, completechorismate mutase/prephenate dehydratase4e-0753.5
NC_009635:518000:522038522038522874837Methanococcus aeolicus Nankai-3 chromosome, complete genomeprephenate dehydratase3e-0650.4