Pre_GI: BLASTP Hits

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Query: NC_008563:4707826:4722436 Escherichia coli APEC O1, complete genome

Start: 4722436, End: 4723077, Length: 642

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (serovar O1) is an avian pathogenic strain and causes respiratory, blood, and enteric infections primarily in poultry. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011745:3405520:341072134107213411362642Escherichia coli ED1a chromosome, complete genomehypothetical protein5e-79293
NC_004431:4319152:432574443257444326385642Escherichia coli CFT073, complete genomehypothetical protein5e-79293
NC_016613:1877688:188674018867401887309570Vibrio sp. EJY3 chromosome 1, complete sequencehypothetical protein2e-1272.4
NC_019970:2080419:208750720875072088157651Thermoanaerobacterium thermosaccharolyticum M0795, complete genomecarbon dioxide concentrating mechanism/carboxysome shell protein7e-0960.5
NC_011837:830436:8471408471408482341095Clostridium kluyveri NBRC 12016, complete genomehypothetical protein2e-0859.3
NC_009706:830461:8471688471688482591092Clostridium kluyveri DSM 555 chromosome, complete genomemicrocompartment shellprotein3e-0858.5