Pre_GI: BLASTP Hits

Some Help

Query: NC_008545:115292:132538 Burkholderia cenocepacia HI2424 plasmid 1, complete sequence

Start: 132538, End: 133767, Length: 1230

Host Lineage: Burkholderia cenocepacia; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This organism (HI2424; BCC1) was isolated as part of a study to find this organism in natural environments. Samples taken from fields that were planted with onions in New York in 1999 and 2000 were examined and it was discovered that isolates were the same as ones that can infect CF patients. This species (genomovar III) is part of the Burkholderia cepacia complex, which consists of 9 closely related species, also known as genomovars. These organisms are commonly found in soil and all are opportunistic pathogens espcially in cystic fibrosis patients.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008061:2153495:2155542215554221567711230Burkholderia cenocepacia AU 1054 chromosome 2, complete sequencemajor facilitator superfamily MFS_15e-164577
NC_010557:679656:6990766990767003051230Burkholderia ambifaria MC40-6 chromosome 3, complete sequencemajor facilitator superfamily MFS_11e-144513
NC_008392:1029134:1030625103062510318541230Burkholderia cepacia AMMD chromosome 3, complete sequencemajor facilitator superfamily MFS_12e-144512
NC_015514:3307199:3343436334343633446471212Cellulomonas fimi ATCC 484 chromosome, complete genomemajor facilitator superfamily protein6e-26118
NC_006361:2225072:2233418223341822346081191Nocardia farcinica IFM 10152, complete genomeputative transporter3e-2099.8
NC_013222:1536203:1559725155972515608851161Robiginitalea biformata HTCC2501, complete genomeMFS permease (drug)4e-1686.3
NC_014834:959986:9656949656949669201227Rhodopseudomonas palustris DX-1 chromosome, complete genomemajor facilitator superfamily protein1e-1481.3
NC_009051:2097271:2102014210201421032401227Methanoculleus marisnigri JR1, complete genomemajor facilitator superfamily MFS_15e-0859.3
NC_019962:1909103:1952539195253919537651227Natrinema pellirubrum DSM 15624, complete genomearabinose efflux permease family protein7e-0652.4