Pre_GI: BLASTP Hits

Some Help

Query: NC_008526:343445:353626 Lactobacillus casei ATCC 334, complete genome

Start: 353626, End: 354336, Length: 711

Host Lineage: Lactobacillus casei; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: This strain was isolated from Emmental cheese. Starter culture for milk fermentation and flavor development of cheese. They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, fermented milks, and other products, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully created, cultivated, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus casei is used as a starter culture during milk fermentation and for the flavor development of certain bacterial-ripened cheeses.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014727:798191:816180816180816881702Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,crispr-associated protein4e-74277
NC_008529:735233:753026753026753727702Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, completeCRISPR-associated protein6e-74276
NC_008054:745704:760882760882761583702Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, completehypothetical protein3e-73274
NC_010610:795975:812476812476813183708Lactobacillus fermentum IFO 3956, complete genomehypothetical protein9e-59226
NC_019673:1988853:203800820380082038724717Saccharothrix espanaensis DSM 44229 complete genomeCRISPR-associated protein cas5 family protein1e-35149
NC_015737:2146953:215817721581772158896720Clostridium sp. SY8519, complete genomehypothetical protein4e-35148
NC_013131:4422000:443010544301054430842738Catenulispora acidiphila DSM 44928, complete genomeCRISPR-associated protein Cas5 family3e-33141
NC_007333:1743890:184050018405001841237738Thermobifida fusca YX, complete genomeCRISPR-associated CT1976 family protein3e-31135
NC_006361:4574536:458656245865624587269708Nocardia farcinica IFM 10152, complete genomehypothetical protein5e-31134
NC_013510:3117837:313465131346513135355705Thermomonospora curvata DSM 43183, complete genomeCRISPR-associated protein Cas5 family2e-30132
NC_007164:775000:779093779093779800708Corynebacterium jeikeium K411, complete genomehypothetical protein1e-29130
NC_012590:977920:990201990201990917717Corynebacterium aurimucosum ATCC 700975, complete genomeCRISPR-associated protein3e-29128
NC_018720:1812000:181630818163081817021714Bifidobacterium asteroides PRL2011 chromosome, complete genomeCRISPR-associated protein Cas52e-28125
NC_014210:1588426:159214415921441592872729Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,CRISPR-associated protein Cas5 family9e-28123
NC_015389:481282:493160493160493864705Coriobacterium glomerans PW2 chromosome, complete genomeCRISPR-associated protein, Cas5e family2e-23109
NC_007333:1743890:183106218310621831826765Thermobifida fusca YX, complete genomeCRISPR-associated CT1976 family protein2e-22106
NC_016109:603829:615937615937616770834Kitasatospora setae KM-6054, complete genomeputative CRISPR-associated protein5e-2098.2
NC_015170:54000:658756587566579705Deinococcus proteolyticus MRP plasmid pDEIPR03, complete sequenceCRISPR-associated protein Cas5 family5e-2097.8
NC_013159:1422370:143391014339101434620711Saccharomonospora viridis DSM 43017, complete genomeCRISPR-associated protein Cas52e-1995.9
NC_008609:2518993:252805925280592528757699Pelobacter propionicus DSM 2379, complete genomeCRISPR-associated protein Cas5 family3e-1892
NC_015951:107360:109267109267110130864Streptomyces violaceusniger Tu 4113 plasmid pSTRVI01, completeCRISPR-associated protein Cas5 family4e-1788.6
NC_013890:1175931:118059511805951181212618Dehalococcoides sp. GT chromosome, complete genomeCRISPR-associated protein Cas5 family1e-1686.7
NC_007356:1165760:120474512047451205362618Dehalococcoides sp. CBDB1, complete genomehypothetical protein1e-1686.7
NC_017186:6395435:644561064456106446320711Amycolatopsis mediterranei S699 chromosome, complete genomehypothetical protein1e-1686.7
NC_014318:6395392:644556664455666446276711Amycolatopsis mediterranei U32 chromosome, complete genomehypothetical protein1e-1686.7
NC_015387:942974:957079957079957744666Marinithermus hydrothermalis DSM 14884 chromosome, complete genomeCRISPR-associated protein Cas5 family2e-1686.3
NC_007775:723925:735589735589736212624Synechococcus sp. JA-3-3Ab, complete genomeCRISPR-associated protein Cas5, Ecoli subtype7e-1684.3
NC_008278:514600:526039526039526866828Frankia alni ACN14a, complete genomehypothetical protein2e-1582.4
NC_007643:185135:201892201892202677786Rhodospirillum rubrum ATCC 11170, complete genomeCRISPR-associated CT1976 family protein2e-1375.9
NC_015676:1663700:167117516711751671897723Methanosalsum zhilinae DSM 4017 chromosome, complete genomeCRISPR-associated protein Cas5 family8e-1270.9
NC_008340:1075500:108152010815201082248729Alkalilimnicola ehrlichei MLHE-1, complete genomeCRISPR-associated protein Cas5 family1e-0963.5
NC_013851:759500:764629764629765312684Allochromatium vinosum DSM 180 chromosome, complete genomeCRISPR-associated protein Cas5 family1e-0757
NC_011894:5468500:549632954963295497150822Methylobacterium nodulans ORS 2060, complete genomeCRISPR-associated protein Cas5 family2e-0756.2
NC_014355:1461355:147253414725341473334801Candidatus Nitrospira defluvii, complete genomeCRISPR-associated protein Cas5e5e-0755.1