Pre_GI: BLASTP Hits

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Query: NC_008463:5246954:5280280 Pseudomonas aeruginosa UCBPP-PA14, complete genome

Start: 5280280, End: 5281605, Length: 1326

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain is a human clinical isolate from a human burn patient. It is infectious in mice, Caenorhabditis elegans, Drosophila melanogaster, and Arabidopsis thaliana. Opportunistic pathogen. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_018080:5091772:5125268512526851265931326Pseudomonas aeruginosa DK2 chromosome, complete genometype IV b pilus protein0843
NC_009656:4527457:4605863460586346071881326Pseudomonas aeruginosa PA7 chromosome, complete genometype IV b pilus protein0842
NC_004129:5373886:5402711540271154040451335Pseudomonas fluorescens Pf-5, complete genomePilO, putative6e-80298
NC_007507:11000:1390713907152531347Xanthomonas campestris pv. vesicatoria str. 85-10 plasmid pXCV183,putative PilO-like pilus assembly protein4e-50199
NC_012751:1296877:1315990131599013173001311Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum), completePilO type IV pilus biogenesis outer membrane protein7e-36152
NC_012751:942315:9426629426629439721311Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum), completePilO type IV pilus biogenesis outer membrane protein2e-33143
NC_005126:2063667:2073784207378420750761293Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein1e-1998.2
NC_007950:185500:2017682017682030571290Polaromonas sp. JS666 plasmid 2, complete sequencehypothetical protein2e-1170.5