Pre_GI: BLASTP Hits

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Query: NC_008463:2017607:2030647 Pseudomonas aeruginosa UCBPP-PA14, complete genome

Start: 2030647, End: 2031909, Length: 1263

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain is a human clinical isolate from a human burn patient. It is infectious in mice, Caenorhabditis elegans, Drosophila melanogaster, and Arabidopsis thaliana. Opportunistic pathogen. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016830:1901488:1913982191398219152411260Pseudomonas fluorescens F113 chromosome, complete genomeprotein MatE2e-105382
NC_013361:2848949:2861987286198728632491263Escherichia coli O26:H11 str. 11368 chromosome, complete genomeO-antigen flippase Wzx7e-40165
NC_015185:1352171:1353568135356813548481281Desulfurobacterium thermolithotrophum DSM 11699 chromosome,polysaccharide biosynthesis protein8e-1582
NC_007511:2072838:2072838207283820740941257Burkholderia sp. 383 chromosome 2, complete sequencePolysaccharide biosynthesis protein1e-1274.3
NC_011026:2450325:2463753246375324650031251Chloroherpeton thalassium ATCC 35110, complete genomepolysaccharide biosynthesis protein3e-1273.2
NC_011916:467106:4804394804394817101272Caulobacter crescentus NA1000 chromosome, complete genomeoligosaccharide translocase/flippase3e-1170.1
NC_006510:3321426:3341644334164433429331290Geobacillus kaustophilus HTA426, complete genomeO-antigen transporter6e-1168.9
NC_010681:934374:9486099486099498681260Burkholderia phytofirmans PsJN chromosome 1, complete sequencepolysaccharide biosynthesis protein5e-1065.9
NC_014119:977136:9835949835949848591266Burkholderia sp. CCGE1002 chromosome chromosome 3, completepolysaccharide biosynthesis protein7e-1065.5
NC_011001:1462532:1480615148061514818681254Burkholderia cenocepacia J2315 chromosome 2, complete sequenceputative exopolysaccharide transporter8e-1065.1
NC_017272:607900:6201606201606214491290Thermus thermophilus SG0.5JP17-16 chromosome, complete genomepolysaccharide biosynthesis protein3e-0963.2
NC_012483:30784:6336163361647131353Acidobacterium capsulatum ATCC 51196, complete genomeputative O-antigen transporter8e-0858.5
NC_013894:117644:1321121321121333981287Thermocrinis albus DSM 14484 chromosome, complete genomepolysaccharide biosynthesis protein1e-0758.2
NC_007613:864084:8770268770268782551230Shigella boydii Sb227, complete genomeO-antigen flippase2e-0757.8
NC_012779:1286500:1294276129427612955231248Edwardsiella ictaluri 93-146, complete genomeO antigen transporter1e-0757.8
NC_014408:682689:7036937036937049521260Methanothermobacter marburgensis str. Marburg chromosome, completepolysaccharide biosynthesis protein1e-0757.8
NC_012759:1983975:1998844199884420000911248Escherichia coli BW2952 chromosome, complete genomeputative polisoprenol-linked O-antigen transporter2e-0757.4
NC_010473:2183567:2197369219736921986161248Escherichia coli str. K-12 substr. DH10B, complete genomepredicted polisoprenol-linked O-antigen transporter2e-0757.4
NC_000913:2092559:2106361210636121076081248Escherichia coli K12, complete genomepredicted polisoprenol-linked O-antigen transporter2e-0757.4
AC_000091:2096672:2110474211047421117211248Escherichia coli W3110 DNA, complete genomepredicted polisoprenol-linked O-antigen transporter2e-0757.4
NC_008563:2182270:2195479219547921967051227Escherichia coli APEC O1, complete genomeputative O-antigen transporter4e-0756.2
NC_011415:2346474:2365729236572923669791251Escherichia coli SE11 chromosome, complete genomehypothetical protein8e-0755.5
NC_006510:3321426:3363539336353933647981260Geobacillus kaustophilus HTA426, complete genomeO-antigen transporter7e-0755.5
NC_015975:99500:1164301164301179111482Lactobacillus ruminis ATCC 27782 chromosome, complete genomeExoploysaccharide biosynthesis flippase enzyme1e-0654.7
NC_014758:1207894:1237144123714412384271284Calditerrivibrio nitroreducens DSM 19672 chromosome, completepolysaccharide biosynthesis protein1e-0654.7
NC_009337:1200722:1214355121435512155691215Chlorobium phaeovibrioides DSM 265 chromosome, complete genomepolysaccharide biosynthesis protein5e-0652.8
NC_013946:2050871:2064784206478420660581275Meiothermus ruber DSM 1279 chromosome, complete genomepolysaccharide biosynthesis protein9e-0652