Pre_GI: BLASTP Hits

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Query: NC_008463:1293079:1314366 Pseudomonas aeruginosa UCBPP-PA14, complete genome

Start: 1314366, End: 1315988, Length: 1623

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain is a human clinical isolate from a human burn patient. It is infectious in mice, Caenorhabditis elegans, Drosophila melanogaster, and Arabidopsis thaliana. Opportunistic pathogen. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008782:2683989:2701523270152327031211599Acidovorax sp. JS42, complete genomeTrbL/VirB6 plasmid conjugal transfer protein1e-92340
NC_008800:1300500:1316984131698413183841401Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,putative conjugal transfer protein4e-40166
NC_006513:38818:4999349993515971605Azoarcus sp. EbN1, complete genomeplasmid like TrbL protein, component of conjugation system9e-39161
NC_016745:2028424:2045659204565920472781620Oceanimonas sp. GK1 chromosome, complete genomeTrbL/VirB6 plasmid conjugal transfer protein1e-37157
NC_016602:2854107:2867942286794228695641623Vibrio furnissii NCTC 11218 chromosome 1, complete sequenceTrbL/VirB6 plasmid conjugal transfer protein2e-37157
NC_008344:2374761:2383773238377323852001428Nitrosomonas eutropha C91, complete genomeTrbL/VirB6 plasmid conjugal transfer protein4e-35149
NC_008344:669498:6800606800606814871428Nitrosomonas eutropha C91, complete genomeTrbL/VirB6 plasmid conjugal transfer protein4e-35149
NC_004741:2593012:260723726072372608043807Shigella flexneri 2a str. 2457T, complete genomeputative mating pair formation protein1e-34148
NC_013456:3011518:3023677302367730252811605Vibrio sp. Ex25 chromosome 1, complete genomeconjugative transfer protein TrbL7e-33142
NC_009800:2651730:2658945265894526603361392Escherichia coli HS, complete genomeP-type conjugative transfer protein TrbL3e-32140
NC_020063:3690308:3726329372632937277231395Enterobacteriaceae bacterium strain FGI 57, complete genomeP-type conjugative transfer protein TrbL2e-28127
NC_013722:1816561:1856743185674318581701428Xanthomonas albilineans, complete genomeputative conjugal transfer protein7e-28125
NC_011000:183928:1953651953651967921428Burkholderia cenocepacia J2315 chromosome 1, complete sequenceputative plasmid conjugal transfer protein1e-25118
NC_006350:3865584:3877520387752038789501431Burkholderia pseudomallei K96243 chromosome 1, complete sequenceputative plasmid conjugal transfer protein4e-25116
NC_007005:5500196:550704355070435508014972Pseudomonas syringae pv. syringae B728a, complete genomeconjugal transfer protein6e-1686.3
NC_006371:1743982:1752944175294417542571314Photobacterium profundum SS9 chromosome 2, complete sequencehypothetical TrbL protein3e-1170.9
NC_015733:1179977:1191396119139611929821587Pseudomonas putida S16 chromosome, complete genomeP-type conjugative transfer protein TrbL1e-0655.1