Pre_GI: BLASTP Hits

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Query: NC_008463:1293079:1296452 Pseudomonas aeruginosa UCBPP-PA14, complete genome

Start: 1296452, End: 1297429, Length: 978

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain is a human clinical isolate from a human burn patient. It is infectious in mice, Caenorhabditis elegans, Drosophila melanogaster, and Arabidopsis thaliana. Opportunistic pathogen. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007510:2284000:2285113228511322862581146Burkholderia sp. 383 chromosome 1, complete sequencetranscriptional regulator, LuxR family5e-35148
NC_018691:896464:915411915411916343933Alcanivorax dieselolei B5 chromosome, complete genomeTranscriptional regulator, LuxR family1e-21104
NC_014931:6203872:622521062252106226187978Variovorax paradoxus EPS chromosome, complete genometranscriptional regulator, LuxR family4e-2099
NC_006569:69939:102382102382103350969Silicibacter pomeroyi DSS-3 megaplasmid, complete sequencetranscriptional regulator, LuxR family5e-0858.9
NC_013165:2700978:2718247271824727198571611Slackia heliotrinireducens DSM 20476, complete genomeresponse regulator containing a CheY-like receiver domain and an HTH DNA-binding domain9e-0754.7
NC_012660:2431803:243882024388202439476657Pseudomonas fluorescens SBW25 chromosome, complete genomeputative two-component system response regulator8e-0754.7
NC_015738:1114919:1135168113516811365471380Eggerthella sp. YY7918, complete genomeDNA-binding HTH domain-containing protein1e-0654.3
NC_013204:2234860:223486022348602235450591Eggerthella lenta DSM 2243, complete genometranscriptional regulator, LuxR family2e-0653.5
NC_015738:873653:8906118906118932382628Eggerthella sp. YY7918, complete genomehypothetical protein3e-0652.8
NC_007760:3948730:396420739642073964734528Anaeromyxobacter dehalogenans 2CP-C, complete genometranscriptional regulator, LuxR family3e-0652.8
NC_010552:335989:3359893359893375331545Burkholderia ambifaria MC40-6 chromosome 2, complete sequencetranscriptional regulator, LuxR family9e-0651.2