Pre_GI: BLASTP Hits

Some Help

Query: NC_008463:1223012:1234934 Pseudomonas aeruginosa UCBPP-PA14, complete genome

Start: 1234934, End: 1235362, Length: 429

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain is a human clinical isolate from a human burn patient. It is infectious in mice, Caenorhabditis elegans, Drosophila melanogaster, and Arabidopsis thaliana. Opportunistic pathogen. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011770:1226923:123912312391231239551429Pseudomonas aeruginosa LESB58, complete genomeDNA polymerase III, chi subunit7e-77285
NC_018080:1100047:111369611136961114124429Pseudomonas aeruginosa DK2 chromosome, complete genomeDNA polymerase III subunit chi2e-76283
NC_002516:4285477:429042742904274290855429Pseudomonas aeruginosa PAO1, complete genomeDNA polymerase III subunit chi2e-76283
NC_020829:4246847:426501642650164265444429Pseudomonas denitrificans ATCC 13867, complete genomeDNA polymerase III subunit chi3e-59226
NC_007484:293763:315513315513315944432Nitrosococcus oceani ATCC 19707, complete genomeDNA polymerase III chi subunit, HolC2e-28124
NC_018012:1076839:109639310963931096824432Thiocystis violascens DSM 198 chromosome, complete genomeDNA polymerase III subunit chi1e-25114
NC_009092:1047500:105247710524771052938462Shewanella loihica PV-4, complete genomeDNA polymerase III chi subunit, HolC3e-23106
NC_002977:2254440:225727322572732257731459Methylococcus capsulatus str. Bath, complete genomeDNA polymerase III, chi subunit, putative3e-1993.6
NC_012912:4194821:420930442093044209753450Dickeya zeae Ech1591, complete genomeDNA-directed DNA polymerase8e-1785.9
NC_014500:443874:446746446746447195450Dickeya dadantii 3937 chromosome, complete genomeDNA polymerase III, subunit chi1e-1685.1
NC_012880:4117376:413062341306234131093471Dickeya dadantii Ech703, complete genomeDNA-directed DNA polymerase3e-1683.6
NC_004547:442927:460923460923461372450Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeDNA polymerase III subunit chi4e-1683.6
NC_007712:3629358:365215036521503652599450Sodalis glossinidius str. 'morsitans', complete genomeDNA polymerase III chi subunit8e-1682.4
NC_000913:4462782:448186044818604482303444Escherichia coli K12, complete genomeDNA polymerase III subunit chi3e-1580.5
AC_000091:4472000:448851744885174488960444Escherichia coli W3110 DNA, complete genomeDNA polymerase III, chi subunit3e-1580.5
NC_010473:4564590:458366845836684584111444Escherichia coli str. K-12 substr. DH10B, complete genomeDNA polymerase III, chi subunit3e-1580.5
NC_020418:116500:159235159235159684450Morganella morganii subsp. morganii KT, complete genomeDNA polymerase III chi subunit3e-1580.5
NC_020063:4127161:415030241503024150745444Enterobacteriaceae bacterium strain FGI 57, complete genomeDNA polymerase III, chi subunit3e-1580.5
NC_012967:4449576:446687044668704467313444Escherichia coli B str. REL606 chromosome, complete genomeDNA polymerase III subunit chi5e-1579.7
NC_010498:4821519:483881248388124839294483Escherichia coli SMS-3-5, complete genomeDNA polymerase III, chi subunit5e-1579.7
NC_011742:4795733:481305648130564813499444Escherichia coli S88 chromosome, complete genomeDNA polymerase III subunit chi5e-1579.7
NC_007613:4217557:423603942360394236482444Shigella boydii Sb227, complete genomeDNA polymerase III chi subunit5e-1579.7
NC_010658:4494103:449410344941034494546444Shigella boydii CDC 3083-94, complete genomeDNA polymerase III, chi subunit5e-1579.7
NC_015061:4203767:422007242200724220557486Rahnella sp. Y9602 chromosome, complete genomeDNA-directed DNA polymerase1e-1479
NC_017047:4298207:431398743139874314472486Rahnella aquatilis HX2 chromosome, complete genomeDNA polymerase III subunit chi1e-1479
NC_020211:554736:557625557625558074450Serratia marcescens WW4, complete genomeDNA polymerase III, chi subunit7e-1372.8
NC_016632:1695500:170252917025291702981453Serratia symbiotica str. 'Cinara cedri' chromosome, completeDNA polymerase III subunit chi8e-1372.4
NC_015136:813701:829230829230829646417Burkholderia sp. CCGE1001 chromosome 1, complete sequenceDNA polymerase III chi subunit HolC1e-1272
NC_017270:2500815:251872225187222519186465Vibrio cholerae LMA3984-4 chromosome chromosome I, completeDNA polymerase III subunit chi2e-1271.2
NC_008825:2063990:207745320774532077887435Methylibium petroleiphilum PM1, complete genomeDNA polymerase III, chi subunit, putative2e-1270.9
NC_011586:268927:334559334559334966408Acinetobacter baumannii AB0057 chromosome, complete genomeDNA polymerase III subunit chi2e-1167.8
NC_010002:3887926:389070038907003891131432Delftia acidovorans SPH-1, complete genomeDNA polymerase III chi subunit HolC5e-0649.7