Pre_GI: BLASTP Hits

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Query: NC_008463:1188951:1193191 Pseudomonas aeruginosa UCBPP-PA14, complete genome

Start: 1193191, End: 1194201, Length: 1011

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain is a human clinical isolate from a human burn patient. It is infectious in mice, Caenorhabditis elegans, Drosophila melanogaster, and Arabidopsis thaliana. Opportunistic pathogen. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_002516:4321000:4331452433145243324621011Pseudomonas aeruginosa PAO1, complete genomehypothetical protein0690
NC_015942:1047576:1067987106798710696511665Acidithiobacillus ferrivorans SS3 chromosome, complete genomeintegrase catalytic subunit2e-143508
NC_016861:22256:3510635106367701665Salmonella enterica subsp. enterica serovar Typhimurium strintegrase, catalytic region1e-135482
NC_003277:22257:3511335113367771665Salmonella typhimurium LT2 plasmid pSLT, complete sequenceputative integrase protein1e-135482
NC_019774:74131:8167681676833371662Anabaena cylindrica PCC 7122 plasmid pANACY.04, complete sequenceIntegrase catalytic region2e-113408
NC_019771:2461000:2474662247466224763231662Anabaena cylindrica PCC 7122, complete genomeIntegrase catalytic region3e-111401
NC_009832:426993:433817433817434737921Serratia proteamaculans 568, complete genomesite-specific recombinase, phage integrase family2e-107389
NC_020210:1704500:1722563172256317238131251Geobacillus sp. GHH01, complete genometransposase5e-0858.9
NC_006510:887545:8963708963708976201251Geobacillus kaustophilus HTA426, complete genomeIS1604-like transposase1e-0757.8
NC_015660:1896904:1897989189798918992421254Geobacillus thermoglucosidasius C56-YS93 chromosome, completeintegrase catalytic subunit2e-0757.4
NC_016593:3402205:3405137340513734063901254Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completeintegrase2e-0757.4
NC_020210:788639:793057793057793677621Geobacillus sp. GHH01, complete genometransposase2e-0757.4
NC_020210:1275031:1316505131650513177551251Geobacillus sp. GHH01, complete genometransposase2e-0757.4
NC_006510:2910000:2936987293698729381501164Geobacillus kaustophilus HTA426, complete genomeIS1604-like transposase1e-0757.4
NC_006510:795973:8061728061728074221251Geobacillus kaustophilus HTA426, complete genomeIS1604-like transposase2e-0757
NC_011750:1978801:2007191200719120089601770Escherichia coli IAI39 chromosome, complete genomehypothetical protein2e-0757
NC_020210:1704500:172962317296231730324702Geobacillus sp. GHH01, complete genometransposase2e-0756.6
NC_015565:2408669:2412382241238224136291248Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completeintegrase catalytic subunit2e-0756.6
NC_015565:824448:8276558276558289021248Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completeintegrase catalytic subunit2e-0756.6
NC_020210:2133996:218504121850412185742702Geobacillus sp. GHH01, complete genometransposase3e-0756.2
NC_007503:2243902:2250848225084822520951248Carboxydothermus hydrogenoformans Z-2901, complete genomeISChy6, transposase1e-0654.3
NC_016593:416661:4298244298244310711248Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completeintegrase2e-0653.9
NC_006510:372826:3873703873703886171248Geobacillus kaustophilus HTA426, complete genometransposase2e-0653.9
NC_016593:1814500:1815564181556418168111248Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completeintegrase2e-0653.9
NC_015958:1516944:1516944151694415182571314Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genomeintegrase catalytic subunit2e-0653.5
NC_020210:788639:8044568044568057031248Geobacillus sp. GHH01, complete genometransposase3e-0652.8