Pre_GI: BLASTP Hits

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Query: NC_008435:2368000:2396355 Rhodopseudomonas palustris BisA53, complete genome

Start: 2396355, End: 2402525, Length: 6171

Host Lineage: Rhodopseudomonas palustris; Rhodopseudomonas; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Four different strains were isolated from 2 sites, one pristine and one polluted. Environmental bacterium with potential use in bioremediation. This organism has a diverse metabolism and is capable of growth using light, inorganic, or organic compounds as energy sources and carbon dioxide or organic compounds as carbon sources. Commonly found in soil and water environments this bacterium is also capable of degrading a wide range of toxic organic compounds, and may be of use in bioremediation of polluted sites. The bacterium undergoes differentiation to produce a stalked nonmotile cell and a motile flagellated cell. In the presence of light, this bacterium produces a number of intracellular membranous vesicles to house the photosynthetic reaction centers.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010622:249625:2726432726432789366294Burkholderia phymatum STM815 chromosome 1, complete sequenceHelicase superfamily 1 and 2 ATP-binding01273
NC_013411:284461:3023593023593077225364Geobacillus sp. Y412MC61, complete genomeDEAD/DEAH box helicase domain protein5e-107390
NC_014915:2427000:2431766243176624371295364Geobacillus sp. Y412MC52 chromosome, complete genomeProtein of unknown function DUF19985e-107390
NC_013406:1217385:1230830123083012361095280Paenibacillus sp. Y412MC10 chromosome, complete genomeDEAD/DEAH box helicase domain-containing protein5e-64248
NC_011830:693555:6961506961507013725223Desulfitobacterium hafniense DCB-2, complete genomeDEAD/DEAH box helicase domain protein1e-62243
NC_013216:3473119:3492468349246834976935226Desulfotomaculum acetoxidans DSM 771, complete genomeDEAD/DEAH box helicase domain protein1e-61239
NC_019897:2908971:2918005291800529232125208Thermobacillus composti KWC4 chromosome, complete genomehelicase family protein with metal-binding cysteine cluster8e-61237
NC_003047:3419212:3419212341921234247105499Sinorhizobium meliloti 1021, complete genomehypothetical protein2e-34149
NC_016114:1474000:1506620150662015122085589Streptomyces flavogriseus ATCC 33331 chromosome, complete genomeDEAD/DEAH box helicase3e-32142
NC_012912:1670784:1679797167979716856435847Dickeya zeae Ech1591, complete genomeDEAD/DEAH box helicase domain protein2e-29132
NC_012108:1664341:1672239167223916781245886Desulfobacterium autotrophicum HRM2, complete genomeDbp3e-29132
NC_004129:3452885:3473854347385434797005847Pseudomonas fluorescens Pf-5, complete genomehelicase4e-28128
NC_008346:331820:3563113563113619475637Syntrophomonas wolfei subsp. wolfei str. Goettingen, completeputative helicase9e-28127
NC_013235:2129982:2166843216684321721855343Nakamurella multipartita DSM 44233, complete genomehelicase domain protein1e-27126
NC_015676:1361468:1388858138885813948636006Methanosalsum zhilinae DSM 4017 chromosome, complete genomeDEAD/DEAH box helicase domain-containing protein1e-25120
NC_006958:748500:7503567503567551584803Corynebacterium glutamicum ATCC 13032, complete genomehelicase3e-23112
NC_003450:747000:7488837488837536854803Corynebacterium glutamicum ATCC 13032, complete genomehelicase family protein3e-23112
NC_008346:584305:5998335998336045694737Syntrophomonas wolfei subsp. wolfei str. Goettingen, completehelicase2e-23112
NC_004369:1268956:1283487128348712848571371Corynebacterium efficiens YS-314, complete genomehypothetical protein5e-23111
NC_006511:4465495:4482333448233344886536321Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein6e-22108
NC_011147:4460726:4477563447756344838836321Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein6e-22108
NC_008596:1302000:1337844133784413428475004Mycobacterium smegmatis str. MC2 155, complete genomeDEAD/DEAH box helicase5e-22108
NC_003198:4676536:4706399470639947101483750Salmonella enterica subsp. enterica serovar Typhi str. CT18,helicase related protein4e-22108
NC_004631:4687270:4689323468932346930723750Salmonella enterica subsp. enterica serovar Typhi Ty2, completehelicase related protein4e-22108
NC_016832:4649432:4665946466594646696953750Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein4e-22108
NC_007645:5160133:5167630516763051733055676Hahella chejuensis KCTC 2396, complete genomeDistinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster3e-20102
NC_013530:2492312:2506155250615525107324578Xylanimonas cellulosilytica DSM 15894, complete genomeDEAD/DEAH box helicase domain protein6e-20101
NC_012587:2298324:2301572230157223077006129Rhizobium sp. NGR234, complete genomeATP-dependent helicase4e-1999
NC_011353:5426793:5440891544089154472056315Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeDEAD/DEAH box helicase2e-1897.1
NC_013008:5382917:5396952539695254032666315Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehypothetical protein2e-1897.1
NC_013941:5192500:5205508520550852118226315Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein1e-1897.1
NC_002655:5382557:5397246539724654035606315Escherichia coli O157:H7 EDL933, complete genomehypothetical protein1e-1897.1
NC_002695:5352554:5367243536724353735576315Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein1e-1897.1
NC_010468:4252940:4256022425602242623366315Escherichia coli ATCC 8739, complete genomeHelicase superfamily 1 and 2 ATP-binding2e-1896.7
NC_010498:4899167:4916328491632849226426315Escherichia coli SMS-3-5, complete genomeDEAD/DEAH box helicase domain-containing protein2e-1896.3
NC_014253:1163783:1179775117977511845984824Methanohalobium evestigatum Z-7303 chromosome, complete genomeDEAD/DEAH box helicase domain-containing protein4e-1895.5
NC_015565:2508345:2512250251225025171034854Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completehypothetical protein4e-1792
NC_008577:2402165:2440874244087424472366363Shewanella sp. ANA-3 chromosome 1, complete sequenceDEAD/DEAH box helicase domain protein2e-1689.7
NC_014659:1731121:1753652175365217585834932Rhodococcus equi 103S, complete genomeDEAD/DEAH box helicase3e-1689.4
NC_008146:861319:8772058772058818364632Mycobacterium sp. MCS, complete genomeDEAD/DEAH box helicase-like protein3e-1689.4
NC_008705:868623:8845098845098891404632Mycobacterium sp. KMS, complete genomeDEAD/DEAH box helicase domain protein3e-1689.4
NC_014410:937599:9471529471529519814830Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,Protein of unknown function DUF19983e-1689
NC_008702:2520500:2531423253142325377526330Azoarcus sp. BH72, complete genomeputative helicase related protein8e-1687.8
NC_010482:701000:7105017105017153334833Candidatus Korarchaeum cryptofilum OPF8, complete genomeDEAD/DEAH box helicase domain protein1e-1587.4
NC_017186:9120711:9142580914258091472834704Amycolatopsis mediterranei S699 chromosome, complete genomeDEAD/DEAH box helicase3e-1585.9
NC_014318:9120651:9142520914252091472234704Amycolatopsis mediterranei U32 chromosome, complete genomeDEAD/DEAH box helicase3e-1585.9
NC_010162:11387949:1139139111391391113976906300Sorangium cellulosum 'So ce 56', complete genomehypothetical protein3e-1585.9
NC_008740:1484531:1486170148617014928116642Marinobacter aquaeolei VT8, complete genomeDEAD/DEAH box helicase domain protein1e-1483.6
NC_004631:4687270:4693110469311046956472538Salmonella enterica subsp. enterica serovar Typhi Ty2, completeDEAD-box helicase-related protein4e-1379
NC_003198:4676536:4710186471018647127232538Salmonella enterica subsp. enterica serovar Typhi str. CT18,DEAD-box helicase-related protein4e-1379
NC_016832:4649432:4669733466973346722702538Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein4e-1379
NC_018524:4235773:4231082423108242357764695Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomehelicase conserved C-terminal domain protein4e-1379
NC_015711:6149615:6159753615975361660556303Myxococcus fulvus HW-1 chromosome, complete genomeDEAD/DEAH box helicase domain-containing protein8e-1377.8
NC_020126:5608880:5631162563116256374736312Myxococcus stipitatus DSM 14675, complete genomeDEAD/DEAH box helicase8e-1377.8
NC_013421:1819036:1819036181903618253506315Pectobacterium wasabiae WPP163, complete genomeDEAD/DEAH box helicase domain protein1e-1277.4
NC_018679:1738126:1769258176925817755606303Alteromonas macleodii str. 'Balearic Sea AD45' chromosome, completehypothetical protein1e-1277
NC_021184:3793285:3815341381534138198614521Desulfotomaculum gibsoniae DSM 7213, complete genomehelicase family protein with metal-binding cysteine cluster4e-1275.5
NC_010424:422029:4346954346954399425248Candidatus Desulforudis audaxviator MP104C, complete genome5e-1275.1
NC_008212:2591750:2611501261150126167925292Haloquadratum walsbyi DSM 16790, complete genomepredicted helicase1e-1173.6
NC_015942:355944:3786453786453839395295Acidithiobacillus ferrivorans SS3 chromosome, complete genomeDEAD/DEAH box helicase domain-containing protein2e-1173.2
NC_017278:48630:6871068710742565547Thermus sp. CCB_US3_UF1 chromosome, complete genomehypothetical protein3e-1172.8
NC_020260:3355814:3368923336892333730654143Cronobacter sakazakii Sp291, complete genomeputative DEAD-box helicase-like protein3e-1172.4
NC_011753:1501868:1501868150186815081256258Vibrio splendidus LGP32 chromosome 1, complete genomehypothetical protein3e-1172.4
NC_007426:1840670:1875459187545918807625304Natronomonas pharaonis DSM 2160, complete genomepredicted helicase5e-1172
NC_018679:1738126:1749993174999317564366444Alteromonas macleodii str. 'Balearic Sea AD45' chromosome, completeDNA helicase5e-1172
NC_015711:3122000:3138789313878931440985310Myxococcus fulvus HW-1 chromosome, complete genomeDEAD/DEAH box helicase domain-containing protein1e-1070.9
NC_013216:1442044:1454991145499114614016411Desulfotomaculum acetoxidans DSM 771, complete genomeDEAD/DEAH box helicase domain protein1e-1070.5
NC_012856:2815797:2822604282260428279165313Ralstonia pickettii 12D chromosome 1, complete genomeDEAD/DEAH box helicase domain protein1e-1070.5
NC_004578:3193490:3218240321824032196191380Pseudomonas syringae pv. tomato str. DC3000, complete genomehelicase domain protein1e-1070.5
NC_013158:1686239:1712412171241217177065295Halorhabdus utahensis DSM 12940, complete genomeDEAD/DEAH box helicase domain protein2e-1070.1
NC_013441:382597:3901333901333963966264Gordonia bronchialis DSM 43247, complete genomeProtein of unknown function DUF19983e-1069.7
NC_013526:835117:8531508531508582465097Thermobaculum terrenum ATCC BAA-798 chromosome 2, complete genomeDEAD/DEAH box helicase domain protein3e-1069.7
NC_015580:1584078:1587364158736415933215958Novosphingobium sp. PP1Y, complete genomehypothetical protein2e-1069.7
NC_013595:8603188:8633748863374886389195172Streptosporangium roseum DSM 43021, complete genomeDEAD/DEAH box helicase domain protein5e-1068.6
NC_015573:2323268:2330178233017823352565079Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomeDEAD/DEAH box helicase domain-containing protein5e-1068.6
NC_007645:3934239:3934239393423939394765238Hahella chejuensis KCTC 2396, complete genomeDistinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster5e-1068.6
NC_005125:2887319:2894349289434929000125664Gloeobacter violaceus PCC 7421, complete genomehypothetical protein7e-1068.2
NC_014151:3611956:3658078365807836632825205Cellulomonas flavigena DSM 20109 chromosome, complete genomeDEAD/DEAH box helicase domain protein7e-1068.2
NC_009434:3611738:3714917371491737212496333Pseudomonas stutzeri A1501, complete genomeputative helicase1e-0967.4
NC_015957:2755709:2755709275570927624676759Streptomyces violaceusniger Tu 4113 chromosome, complete genomehypothetical protein1e-0967.4
NC_008278:6854759:6870838687083868772726435Frankia alni ACN14a, complete genomePutative helicase2e-0966.6
NC_006513:148950:1698831698831736233741Azoarcus sp. EbN1, complete genomehelicase (putative RNA helicase), fragment3e-0965.9
NC_013941:5192500:5219841521984152261826342Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeDEAD/DEAH box helicase6e-0965.1
NC_013941:5219841:5219841521984152261826342Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeDEAD/DEAH box helicase6e-0965.1
NC_002695:5381576:5381576538157653879176342Escherichia coli O157:H7 str. Sakai, complete genomeputative RNA helicase6e-0965.1
NC_011353:5426793:5455224545522454615656342Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeDEAD/DEAH box helicase6e-0965.1
NC_011353:5455224:5455224545522454615656342Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeDEAD/DEAH box helicase6e-0965.1
NC_013008:5382917:5411285541128554176266342Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehelicase6e-0965.1
NC_013008:5411285:5411285541128554176266342Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehelicase6e-0965.1
NC_010498:4930649:4930649493064949369906342Escherichia coli SMS-3-5, complete genomeDEAD/DEAH box helicase domain-containing protein7e-0964.7
NC_013929:1799594:1799594179959418059476354Streptomyces scabiei 87.22 chromosome, complete genomeserine/threonine-protein kinase1e-0863.9
NC_015588:1213873:1235585123558512421186534Isoptericola variabilis 225 chromosome, complete genomeDEAD/DEAH box helicase domain protein1e-0863.9
NC_015510:3543352:3558041355804135632365196Haliscomenobacter hydrossis DSM 1100 chromosome, complete genomeDEAD/DEAH box helicase domain-containing protein2e-0863.5
NC_017093:6461486:6461486646148664679176432Actinoplanes missouriensis 431, complete genomeputative DEAD/DEAH box helicase2e-0863.5
NC_008697:55406:8009980099853245226Nocardioides sp. JS614 plasmid pNOCA01, complete sequenceDEAD/DEAH box helicase domain protein2e-0863.2
NC_006677:1596560:1646189164618916513545166Gluconobacter oxydans 621H, complete genomeProbable ATP-dependent helicase Lhr2e-0863.2
NC_008782:867344:8750158750158803125298Acidovorax sp. JS42, complete genomeDEAD/DEAH box helicase domain protein2e-0863.2
NC_015167:2663686:2678734267873426850396306Cellulophaga lytica DSM 7489 chromosome, complete genomehypothetical protein2e-0863.2
NC_008686:1472899:1492584149258414977615178Paracoccus denitrificans PD1222 chromosome 1, complete sequenceDEAD/DEAH box helicase domain protein2e-0862.8
NC_010554:2646806:2707018270701827134406423Proteus mirabilis HI4320, complete genomeDNA helicase4e-0862.4
NC_015434:3755560:3755560375556037619856426Verrucosispora maris AB-18-032 chromosome, complete genomeRNA helicase7e-0861.2
NC_008639:1462000:1487371148737114925305160Chlorobium phaeobacteroides DSM 266, complete genomeDEAD/DEAH box helicase domain protein8e-0861.2
NC_015576:612164:6263136263136325856273Mycobacterium sp. JDM601 chromosome, complete genomehelicase superfamily protein8e-0861.2
NC_010831:931961:9568719568719606443774Chlorobium phaeobacteroides BS1, complete genome9e-0861.2
NC_012811:1105395:1100140110014011053985259Methylobacterium extorquens AM1 megaplasmid, complete sequenceDEAD/DEAH box helicase domain protein9e-0861.2
NC_010172:280092:3025143025143077785265Methylobacterium extorquens PA1, complete genomeDEAD/DEAH box helicase domain protein1e-0760.8
NC_014659:1731121:1733926173392617403156390Rhodococcus equi 103S, complete genomeDEAD/DEAH box helicase1e-0760.5
NC_006958:748500:7647077647077710096303Corynebacterium glutamicum ATCC 13032, complete genomehelicase9e-0757.8
NC_003450:747000:7632347632347695366303Corynebacterium glutamicum ATCC 13032, complete genomeputative helicase9e-0757.8
NC_013929:2375613:2424894242489424316166723Streptomyces scabiei 87.22 chromosome, complete genomeRNA helicase1e-0657
NC_013757:3897413:3912101391210139184756375Geodermatophilus obscurus DSM 43160, complete genomeProtein of unknown function DUF19983e-0655.8
NC_016111:1484424:1491920149192014986456726Streptomyces cattleya NRRL 8057, complete genomehelicase5e-0655.5
NC_004369:3082691:3082691308269130889936303Corynebacterium efficiens YS-314, complete genomehypothetical protein6e-0655.1