Pre_GI: BLASTP Hits

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Query: NC_008380:855246:888922 Rhizobium leguminosarum bv. viciae 3841, complete genome

Start: 888922, End: 890082, Length: 1161

Host Lineage: Rhizobium leguminosarum; Rhizobium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This biovar nodulates legumes in the Tribe Viciae (Vicia, Pisum, Lathyrus, Lens). This strain is a spontaneous streptomycin-resistant mutant of strain 300. Nitrogen-fixing plant symbiont. This organism, like other Rhizobia, establishes a symbiotic relationship with a legume plant, providing nitrogen in exchange for a protected environment. The legume roots secrete flavonoids and isoflavonoids which the bacteria recognize and use to turn on genes involved in root nodulation. Many of the root nodulation genes are involved in synthesis and secretion of a nodule inducing signal, a lipochito-oligosaccharide molecule, which the plant recognizes, triggering nodule formation. The bacterium is endocytosed and exists inside a membrane bound organelle, the symbiosome, and fixes nitrogen for the plant cell while the host cell provides carbon compounds for the bacterium to grow on. The nitrogen fixation is important as it obviates the need for expensive and environmentally damaging fertilizer use.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008781:3302934:3313711331371133148531143Polaromonas naphthalenivorans CJ2, complete genomeLPS biosynthesis protein WbpG5e-93341
NC_005139:343500:3629043629043640551152Vibrio vulnificus YJ016 chromosome I, complete sequenceputitive LPS biosynthesis protein7e-89327
NC_015732:529201:5657535657535668921140Spirochaeta caldaria DSM 7334 chromosome, complete genomeN-acetyl sugar amidotransferase3e-88325
NC_002516:3519000:3533948353394835350811134Pseudomonas aeruginosa PAO1, complete genomeLPS biosynthesis protein WbpG3e-87322
NC_009656:1994392:2017487201748720186291143Pseudomonas aeruginosa PA7 chromosome, complete genomeLPS biosynthesis protein WbpG1e-84313
NC_011768:1718869:1737871173787117390101140Desulfatibacillum alkenivorans AK-01, complete genomePP-loop domain protein2e-84312
NC_005363:1604337:1626805162680516279891185Bdellovibrio bacteriovorus HD100, complete genomeLPS biosynthesis protein WbpG1e-83310
NC_015379:1887275:1905250190525019063981149Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Putative LPS biosynthesis protein WbpG5e-83308
NC_015424:3112637:3133519313351931346641146Aeromonas veronii B565 chromosome, complete genomeamidotransferase9e-83307
NC_009483:1936486:1961615196161519627571143Geobacter uraniireducens Rf4 chromosome, complete genomehypothetical protein4e-82305
NC_014640:6745873:6760689676068967618341146Achromobacter xylosoxidans A8 chromosome, complete genomeLPS biosynthesis protein WbpG1e-81303
NC_015703:4531578:4556271455627145573981128Runella slithyformis DSM 19594 chromosome, complete genomeN-acetyl sugar amidotransferase5e-77288
NC_009659:2523874:2542093254209325432411149Janthinobacterium sp. Marseille chromosome, complete genomeLPS biosynthesis protein WbpG2e-63243
NC_009850:661802:6800756800756812471173Arcobacter butzleri RM4018, complete genomeputative LPS biosynthesis protein WbpG1e-60233
NC_014323:4792048:4807883480788348091151233Herbaspirillum seropedicae SmR1 chromosome, complete genomecell cycle control ATPase1e-59230
NC_018645:4277393:4296258429625842973581101Desulfobacula toluolica Tol2, complete genomehypothetical protein3e-1583.2
NC_019977:1456366:1472871147287114739471077Methanomethylovorans hollandica DSM 15978, complete genomeputative ATPase of the PP-loop superfamily implicated in cell cycle control3e-1273.2
NC_013522:698114:7114587114587126301173Thermanaerovibrio acidaminovorans DSM 6589, complete genomeLPS biosynthesis protein2e-1170.9
NC_005139:305420:3295243295243306601137Vibrio vulnificus YJ016 chromosome I, complete sequenceputitive LPS biosynthesis protein2e-1067.4
NC_017187:641822:6532026532026543621161Arcobacter butzleri ED-1, complete genomeLPS biosynthesis protein1e-0861.2
NC_005071:87907:1123301123301135771248Prochlorococcus marinus str. MIT 9313, complete genomeLPS biosynthesis protein1e-0757.8
NC_013061:4712051:4734063473406347353161254Pedobacter heparinus DSM 2366, complete genomeputative LPS biosynthesis protein2e-0757.8
NC_008820:1766973:1773623177362317747531131Prochlorococcus marinus str. MIT 9303, complete genomehypothetical protein2e-0757
NC_013194:69634:8482584825868792055Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completeglutamine amidotransferase class-II8e-0755.1
NC_013722:1785692:1785692178569217885172826Xanthomonas albilineans, complete genomeamino acid adenylation;albicidin synthetase protein1e-0654.3