Pre_GI: BLASTP Hits

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Query: NC_008380:4078670:4078670 Rhizobium leguminosarum bv. viciae 3841, complete genome

Start: 4078670, End: 4080148, Length: 1479

Host Lineage: Rhizobium leguminosarum; Rhizobium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This biovar nodulates legumes in the Tribe Viciae (Vicia, Pisum, Lathyrus, Lens). This strain is a spontaneous streptomycin-resistant mutant of strain 300. Nitrogen-fixing plant symbiont. This organism, like other Rhizobia, establishes a symbiotic relationship with a legume plant, providing nitrogen in exchange for a protected environment. The legume roots secrete flavonoids and isoflavonoids which the bacteria recognize and use to turn on genes involved in root nodulation. Many of the root nodulation genes are involved in synthesis and secretion of a nodule inducing signal, a lipochito-oligosaccharide molecule, which the plant recognizes, triggering nodule formation. The bacterium is endocytosed and exists inside a membrane bound organelle, the symbiosome, and fixes nitrogen for the plant cell while the host cell provides carbon compounds for the bacterium to grow on. The nitrogen fixation is important as it obviates the need for expensive and environmentally damaging fertilizer use.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011769:787496:7908717908717921661296Desulfovibrio vulgaris str. 'Miyazaki F', complete genomeextracellular solute-binding protein family 11e-1584.7
NC_011899:86800:9030190301915361236Halothermothrix orenii H 168, complete genomeextracellular solute-binding protein family 13e-1584
NC_014364:1899983:1918380191838019196721293Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeextracellular solute-binding protein family 14e-1376.6
NC_015690:2039215:2052584205258420539121329Paenibacillus mucilaginosus KNP414 chromosome, complete genomeextracellular solute-binding protein4e-1376.6
NC_016935:2567039:2601872260187226032001329Paenibacillus mucilaginosus 3016 chromosome, complete genomeextracellular solute-binding protein1e-1274.7
NC_012669:1011473:1017836101783610192361401Beutenbergia cavernae DSM 12333, complete genomeextracellular solute-binding protein family 13e-1273.9
NC_014246:1787154:1798378179837817996131236Mobiluncus curtisii ATCC 43063 chromosome, complete genomesugar ABC transporter substrate-binding protein3e-1273.6
NC_013131:7945280:7972883797288379740971215Catenulispora acidiphila DSM 44928, complete genomeextracellular solute-binding protein family 15e-1272.8
NC_015953:5865733:5905559590555959068211263Streptomyces sp. SirexAA-E chromosome, complete genomefamily 1 extracellular solute-binding protein6e-1272.8
NC_016641:1984206:1986876198687619881261251Paenibacillus terrae HPL-003 chromosome, complete genomesugar ABC transporter periplasmic protein1e-1172
NC_014958:514225:5359135359135372171305Deinococcus maricopensis DSM 21211 chromosome, complete genomefamily 1 extracellular solute-binding protein2e-1170.9
NC_013526:439813:4416824416824430281347Thermobaculum terrenum ATCC BAA-798 chromosome 2, complete genomeextracellular solute-binding protein family 14e-1170.1
NC_014656:1365673:1383889138388913852141326Bifidobacterium longum subsp. longum BBMN68 chromosome, completesolute binding protein of abc transporter system6e-1169.3
NC_021182:966839:9705849705849718611278Clostridium pasteurianum BC1, complete genomeABC-type sugar transport system, periplasmic component6e-1169.3
NC_013202:906044:9060449060449073451302Halomicrobium mukohataei DSM 12286, complete genomeextracellular solute-binding protein family 16e-1169.3
NC_017079:4550406:4558150455815045595291380Caldilinea aerophila DSM 14535 = NBRC 104270, complete genomeputative ABC transporter substrate binding protein8e-1168.9
NC_014212:3091571:3099872309987231012211350Meiothermus silvanus DSM 9946 chromosome, complete genomeextracellular solute-binding protein family 11e-1068.6
NC_014831:2258398:2263861226386122652011341Thermaerobacter marianensis DSM 12885 chromosome, complete genomeextracellular solute-binding protein family 12e-1067.4
NC_016641:4653889:4671448467144846727221275Paenibacillus terrae HPL-003 chromosome, complete genomefamily 1 extracellular solute-binding protein3e-1067.4
NC_014219:192555:2015922015922029081317Bacillus selenitireducens MLS10 chromosome, complete genomeextracellular solute-binding protein family 13e-1067
NC_020210:1951746:1962799196279919641211323Geobacillus sp. GHH01, complete genomeExtracellular solute-binding protein family 13e-1067
NC_014915:2149884:2155118215511821564311314Geobacillus sp. Y412MC52 chromosome, complete genomeextracellular solute-binding protein family 13e-1067
NC_013411:3010000:3015187301518730165001314Geobacillus sp. Y412MC61, complete genomeextracellular solute-binding protein family 13e-1067
NC_006087:237500:2634602634602646291170Leifsonia xyli subsp. xyli str. CTCB07, complete genomemaltose/trehalose porter3e-1067
NC_007492:2994036:3021803302180330231131311Pseudomonas fluorescens PfO-1, complete genomeextracellular solute-binding protein, family 16e-1066.2
NC_014618:586240:5922685922685935151248Enterobacter cloacae SCF1 chromosome, complete genomeextracellular solute-binding protein7e-1065.9
NC_010175:1531212:1542787154278715441841398Chloroflexus aurantiacus J-10-fl, complete genomeextracellular solute-binding protein family 17e-1065.9
NC_017218:31247:4968249682510551374Bifidobacterium breve ACS-071-V-Sch8b chromosome, complete genomeABC transporter substrate-binding protein9e-1065.5
NC_014532:1713987:1728058172805817293681311Halomonas elongata DSM 2581, complete genomeABC-type transport system periplasmic substrate-binding protein2e-0964.7
NC_016641:2618587:2645924264592426471771254Paenibacillus terrae HPL-003 chromosome, complete genomefamily 1 extracellular solute-binding protein4e-0963.5
NC_013592:713036:7527397527397540611323Dickeya dadantii Ech586, complete genomeextracellular solute-binding protein family 14e-0963.5
NC_015690:3941113:3999206399920640005281323Paenibacillus mucilaginosus KNP414 chromosome, complete genomefamily 1 extracellular solute-binding protein8e-0962.4
NC_017079:1084684:1100260110026011014951236Caldilinea aerophila DSM 14535 = NBRC 104270, complete genomeputative ABC transporter substrate binding protein7e-0962.4
NC_013517:773280:7751637751637764041242Sebaldella termitidis ATCC 33386, complete genomeextracellular solute-binding protein family 17e-0962.4
NC_015856:1271295:1289565128956512909831419Collimonas fungivorans Ter331 chromosome, complete genomeABC sugar transporter, periplasmic ligand binding protein2e-0861.2
NC_014652:757381:7573817573817587451365Caldicellulosiruptor hydrothermalis 108 chromosome, completeextracellular solute-binding protein family 12e-0861.2
NC_016935:1365463:1418581141858114199781398Paenibacillus mucilaginosus 3016 chromosome, complete genomefamily 1 extracellular solute-binding protein2e-0861.2
NC_014644:1532500:1554471155447115556941224Gardnerella vaginalis ATCC 14019 chromosome, complete genomeABC transporter binding protein2e-0861.2
NC_014364:815346:8385568385568398301275Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeextracellular solute-binding protein family 12e-0860.8
NC_013642:574673:5924275924275936051179Thermotoga naphthophila RKU-10, complete genomeextracellular solute-binding protein family 12e-0860.5
NC_008699:3896816:3905693390569339069911299Nocardioides sp. JS614, complete genomeextracellular solute-binding protein, family 13e-0860.5
NC_014364:3500041:3506794350679435080321239Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeextracellular solute-binding protein family 14e-0860.1
NC_019896:1989997:1999551199955120007561206Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completeSugar ABC transporter substrate-binding protein4e-0860.1
NC_015634:2991669:2994762299476229961051344Bacillus coagulans 2-6 chromosome, complete genomeglycerol-3-phosphate ABC transporter substrate-binding protein5e-0859.7
NC_016860:4024000:4046385404638540476951311Salmonella enterica subsp. enterica serovar Typhimurium strglycerol-3-phosphate-binding periplasmic protein5e-0859.7
NC_012912:3853377:3854455385445538557771323Dickeya zeae Ech1591, complete genomeextracellular solute-binding protein family 15e-0859.7
NC_008095:8890464:8911123891112389124031281Myxococcus xanthus DK 1622, complete genomeputative sugar ABC transporter, periplasmic sugar-binding protein7e-0858.9
NC_014829:1154520:1155755115575511570861332Bacillus cellulosilyticus DSM 2522 chromosome, complete genomeextracellular solute-binding protein family 19e-0858.9
NC_016641:4653889:4669035466903546702971263Paenibacillus terrae HPL-003 chromosome, complete genomefamily 1 extracellular solute-binding protein1e-0758.5
NC_013205:854983:8668678668678682491383Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,extracellular solute-binding protein family 11e-0758.5
NC_014915:1909275:1921556192155619229171362Geobacillus sp. Y412MC52 chromosome, complete genomeextracellular solute-binding protein family 11e-0758.5
NC_013411:2767400:2781619278161927829831365Geobacillus sp. Y412MC61, complete genomeextracellular solute-binding protein family 11e-0758.5
NC_011283:5011497:5033154503315450344641311Klebsiella pneumoniae 342 chromosome, complete genomeABC transporter substrate-binding protein1e-0758.2
NC_013406:3926531:3941852394185239432551404Paenibacillus sp. Y412MC10 chromosome, complete genomefamily 1 extracellular solute-binding protein1e-0758.2
NC_013850:4829455:4856074485607448573841311Klebsiella variicola At-22 chromosome, complete genomeextracellular solute-binding protein family 11e-0758.2
NC_015848:3175692:3197808319780831991181311Mycobacterium canettii CIPT 140010059, complete genomeputative Sn-glycerol-3-phosphate-binding lipoprotein UGPB2e-0757.8
NC_019950:3139865:3162191316219131635011311Mycobacterium canettii CIPT 140060008 complete genomePutative Sn-glycerol-3-phosphate-binding lipoprotein UgpB2e-0757.8
NC_012669:1700626:1728388172838817297431356Beutenbergia cavernae DSM 12333, complete genomeextracellular solute-binding protein family 12e-0757.8
NC_014720:2420455:2437885243788524391111227Caldicellulosiruptor kronotskyensis 2002 chromosome, completeextracellular solute-binding protein family 13e-0757.4
NC_020291:1045058:1051597105159710528561260Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeextracellular solute-binding protein, family 13e-0757
NC_014829:4088494:4107683410768341090171335Bacillus cellulosilyticus DSM 2522 chromosome, complete genomeextracellular solute-binding protein family 13e-0757
NC_014652:2323598:2330356233035623315821227Caldicellulosiruptor hydrothermalis 108 chromosome, completeextracellular solute-binding protein family 13e-0757
NC_017079:2243451:2251087225108722522951209Caldilinea aerophila DSM 14535 = NBRC 104270, complete genomeputative ABC transporter substrate binding protein4e-0756.6
NC_009437:475817:4947954947954960211227Caldicellulosiruptor saccharolyticus DSM 8903, complete genomeextracellular solute-binding protein4e-0756.6
NC_013521:302574:3359023359023371611260Sanguibacter keddieii DSM 10542, complete genomeABC-type sugar transport system, periplasmic component6e-0756.2
NC_000961:172610:1802331802331818671635Pyrococcus horikoshii OT3, complete genomehypothetical protein5e-0756.2
NC_012880:3827390:3830190383019038314971308Dickeya dadantii Ech703, complete genomeextracellular solute-binding protein family 16e-0755.8
NC_015052:2383865:2388169238816923895091341Bifidobacterium longum subsp. infantis 157F, complete genomeABC transporter substrate-binding protein6e-0755.8
NC_012880:2399205:2416897241689724181891293Dickeya dadantii Ech703, complete genomeextracellular solute-binding protein family 18e-0755.8
NC_008618:200017:2074392074392087191281Bifidobacterium adolescentis ATCC 15703, complete genomesolute binding protein of ABC transporter system8e-0755.5
NC_008149:2517538:2520200252020025214681269Yersinia pestis Nepal516, complete genomeexported solute-binding protein9e-0755.5
NC_015949:2101302:2106691210669121079171227Caldicellulosiruptor lactoaceticus 6A chromosome, complete genomefamily 1 extracellular solute-binding protein1e-0655.5
NC_014392:412916:4339374339374351631227Caldicellulosiruptor obsidiansis OB47 chromosome, complete genomeextracellular solute-binding protein family 11e-0655.1
NC_014010:1020488:1020488102048810217921305Candidatus Puniceispirillum marinum IMCC1322 chromosome, completeperiplasmic sorbitol-binding protein, putative1e-0655.1
NC_015138:4666544:4687186468718646885231338Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completefamily 1 extracellular solute-binding protein1e-0655.1
NC_014721:373607:3913783913783926041227Caldicellulosiruptor kristjanssonii 177R1B chromosome, completeextracellular solute-binding protein family 11e-0655.1
NC_013525:556036:5660345660345675781545Thermobaculum terrenum ATCC BAA-798 chromosome 1, complete genomeextracellular solute-binding protein family 12e-0654.7
NC_010572:2843589:2863797286379728650441248Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative ABC transporter substrate-binding protein2e-0654.3
NC_019897:3810000:3818655381865538200731419Thermobacillus composti KWC4 chromosome, complete genomesugar ABC transporter substrate-binding protein2e-0653.9
NC_012034:438000:4587584587584599841227Anaerocellum thermophilum DSM 6725, complete genomeextracellular solute-binding protein family 12e-0653.9
NC_016641:4011000:4028112402811240294521341Paenibacillus terrae HPL-003 chromosome, complete genomefamily 1 extracellular solute-binding protein4e-0653.5
NC_010001:4168817:4172661417266141740161356Clostridium phytofermentans ISDg, complete genomeextracellular solute-binding protein family 14e-0653.5
NC_015671:874500:8980898980898994231335Cellvibrio gilvus ATCC 13127 chromosome, complete genomefamily 1 extracellular solute-binding protein5e-0653.1
NC_014844:659829:7003187003187016251308Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomefamily 1 extracellular solute-binding protein7e-0652.8
NC_008698:1556223:1564595156459515659471353Thermofilum pendens Hrk 5, complete genomeextracellular solute-binding protein, family 18e-0652.4
NC_012491:6143928:6148872614887261501701299Brevibacillus brevis NBRC 100599, complete genomeprobable ABC transporter substrate binding protein1e-0552