Pre_GI: BLASTP Hits

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Query: NC_008380:2287327:2302955 Rhizobium leguminosarum bv. viciae 3841, complete genome

Start: 2302955, End: 2303281, Length: 327

Host Lineage: Rhizobium leguminosarum; Rhizobium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This biovar nodulates legumes in the Tribe Viciae (Vicia, Pisum, Lathyrus, Lens). This strain is a spontaneous streptomycin-resistant mutant of strain 300. Nitrogen-fixing plant symbiont. This organism, like other Rhizobia, establishes a symbiotic relationship with a legume plant, providing nitrogen in exchange for a protected environment. The legume roots secrete flavonoids and isoflavonoids which the bacteria recognize and use to turn on genes involved in root nodulation. Many of the root nodulation genes are involved in synthesis and secretion of a nodule inducing signal, a lipochito-oligosaccharide molecule, which the plant recognizes, triggering nodule formation. The bacterium is endocytosed and exists inside a membrane bound organelle, the symbiosome, and fixes nitrogen for the plant cell while the host cell provides carbon compounds for the bacterium to grow on. The nitrogen fixation is important as it obviates the need for expensive and environmentally damaging fertilizer use.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008254:611437:611437611437611757321Mesorhizobium sp. BNC1, complete genometranscriptional regulator, XRE family1e-33141
NC_012811:410776:421061421061421381321Methylobacterium extorquens AM1 megaplasmid, complete sequenceputative transcriptional regulator2e-31134
NC_010995:1417329:141941314194131419736324Cellvibrio japonicus Ueda107, complete genomeHelix-turn-helix motif2e-21100
NC_004757:2730057:277686827768682777188321Nitrosomonas europaea ATCC 19718, complete genomeHelix-turn-helix motif1e-2098.2
NC_010170:4800000:489749048974904897813324Bordetella petrii, complete genomeHTH-type transcriptional regulator1e-1995.5
NC_007645:6407370:641820964182096418529321Hahella chejuensis KCTC 2396, complete genomepredicted transcriptional regulator3e-1994
NC_007645:5801295:580985358098535810188336Hahella chejuensis KCTC 2396, complete genomepredicted transcriptional regulator3e-1580.5
NC_014910:465980:495325495325495654330Alicycliphilus denitrificans BC chromosome, complete genomehelix-turn-helix domain protein4e-1580.1
NC_008825:2525380:254043925404392540762324Methylibium petroleiphilum PM1, complete genomehelix-turn-helix protein1e-1478.6
NC_009076:75535:873628736287685324Burkholderia pseudomallei 1106a chromosome I, complete sequencetranscriptional regulator, XRE family4e-1476.6
NC_014540:2933853:295871529587152959032318Burkholderia sp. CCGE1003 chromosome 2, complete sequencehelix-turn-helix domain-containing protein9e-1475.5
NC_011000:1216430:123284312328431233166324Burkholderia cenocepacia J2315 chromosome 1, complete sequenceputative DNA-binding protein9e-1475.5
NC_008543:2220698:222946722294672229790324Burkholderia cenocepacia HI2424 chromosome 2, complete sequencetranscriptional regulator, XRE family1e-1375.5
NC_007645:5724000:574088657408865741206321Hahella chejuensis KCTC 2396, complete genomepredicted transcriptional regulator1e-1375.1
NC_013194:4405764:441480444148044415130327Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completetranscriptional regulator, XRE family9e-1372.4
NC_009256:3601080:361300036130003613326327Burkholderia vietnamiensis G4 chromosome 1, complete sequenceXRE family transcriptional regulator1e-1168.2
NC_010338:1216385:122403012240301224350321Caulobacter sp. K31, complete genometranscriptional regulator, XRE family1e-0961.6
NC_011773:1277606:130510913051091305432324Bacillus cereus AH820 chromosome, complete genometranscriptional regulator SinR2e-0858.2
NC_021182:2536000:253788925378892538323435Clostridium pasteurianum BC1, complete genomeputative transcriptional regulator8e-0752.4
NC_012891:1277966:129143912914391292212774Streptococcus dysgalactiae subsp. equisimilis GGS_124 chromosome 1,hypothetical protein1e-0652
NC_012891:1100726:111421611142161114566351Streptococcus dysgalactiae subsp. equisimilis GGS_124 chromosome 1,putative phage DNA-binding protein1e-0652
NC_017199:31500:355233552335900378Bacillus thuringiensis serovar finitimus YBT-020 plasmid pBMB28,putative transcriptional regulator1e-0651.6
NC_013766:679906:683546683546683872327Listeria monocytogenes 08-5578 chromosome, complete genometranscriptional regulator2e-0651.6
NC_009332:653474:656458656458656808351Streptococcus pyogenes str. Manfredo chromosome, complete genomeDNA-binding phage protein2e-0651.2
NC_003485:296140:296536296536296886351Streptococcus pyogenes MGAS8232, complete genomeputative repressor protein3e-0650.8
NC_004606:1107500:114453911445391144889351Streptococcus pyogenes SSI-1, complete genomeputative repressor protein3e-0650.8
NC_013892:1272448:128399912839991284364366Xenorhabdus bovienii SS-2004 chromosome, complete genomeDNA-binding protein3e-0650.8
NC_009487:921884:924292924292924624333Staphylococcus aureus subsp. aureus JH9 chromosome, completeXRE family transcriptional regulator3e-0650.8
NC_009632:921759:924167924167924499333Staphylococcus aureus subsp. aureus JH1 chromosome, completehypothetical protein3e-0650.8
NC_004070:747146:751867751867752256390Streptococcus pyogenes MGAS315, complete genomeputative repressor - phage associated2e-0650.8
NC_008527:2112137:212385221238522124235384Lactococcus lactis subsp. cremoris SK11, complete genomeTranscriptional regulator, xre family6e-0649.7
NC_014136:1879049:188141618814161881754339Leuconostoc kimchii IMSNU11154 chromosome, complete genomehypothetical protein6e-0649.7
NC_010321:35855:358553585536244390Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, completeXRE family transcriptional regulator8e-0649.3
NC_014964:35862:358623586236251390Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completehelix-turn-helix domain-containing protein8e-0649.3