Pre_GI: BLASTP Hits

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Query: NC_008380:2287327:2298695 Rhizobium leguminosarum bv. viciae 3841, complete genome

Start: 2298695, End: 2299228, Length: 534

Host Lineage: Rhizobium leguminosarum; Rhizobium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This biovar nodulates legumes in the Tribe Viciae (Vicia, Pisum, Lathyrus, Lens). This strain is a spontaneous streptomycin-resistant mutant of strain 300. Nitrogen-fixing plant symbiont. This organism, like other Rhizobia, establishes a symbiotic relationship with a legume plant, providing nitrogen in exchange for a protected environment. The legume roots secrete flavonoids and isoflavonoids which the bacteria recognize and use to turn on genes involved in root nodulation. Many of the root nodulation genes are involved in synthesis and secretion of a nodule inducing signal, a lipochito-oligosaccharide molecule, which the plant recognizes, triggering nodule formation. The bacterium is endocytosed and exists inside a membrane bound organelle, the symbiosome, and fixes nitrogen for the plant cell while the host cell provides carbon compounds for the bacterium to grow on. The nitrogen fixation is important as it obviates the need for expensive and environmentally damaging fertilizer use.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007005:4062311:408154340815434081995453Pseudomonas syringae pv. syringae B728a, complete genomePilT protein, N-terminal1e-1065.9
NC_014722:1467996:147520314752031475676474Burkholderia rhizoxinica HKI 454, complete genomePlasmid stability protein stbB7e-1063.2
NC_012751:942315:969318969318969734417Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum), completeaddiction module, PIN domain protein2e-0858.5
NC_015730:3662934:367261836726183673034417Roseobacter litoralis Och 149 chromosome, complete genomehypothetical protein2e-0755.5
NC_011901:2202690:221248522124852212892408Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completePilT protein-like protein7e-0753.5
NC_006672:47610:514515145151879429Gluconobacter oxydans 621H plasmid pGOX1, complete sequencePlasmid stability-like protein7e-0753.5
NC_013862:27991:402040204445426Allochromatium vinosum DSM 180 plasmid pALVIN02, complete sequencePilT protein domain protein8e-0753.1
NC_014366:3653190:367297936729793673524546Gamma proteobacterium HdN1, complete genomePIN (PilT N terminus) domain protein2e-0652.4