Pre_GI: BLASTP Hits

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Query: NC_008278:3601959:3618127 Frankia alni ACN14a, complete genome

Start: 3618127, End: 3618387, Length: 261

Host Lineage: Frankia alni; Frankia; Frankiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from a green alder (Alnus crispa) growing in Tadoussac, Canada. These bacteria were originally linked to fungi, because of the mycelium-like filaments many of them form. This bacterium is able to establish a nitrogen-fixing symbiosis with alder (Alnus spp.) and myrtle (Myrica spp.), two pioneer plant genera of temperate regions, found on forest clearings, mine wastes, sand dunes and glacial moraines where nitrogen is the limiting factor. Frankia alni causes root hair deformation: it penetrates the cortical cells and induces the formation of nodules which resemble those induced by Rhizobium in legumes. These nodules are then colonized by vegetative hyphae (mycelium filaments) which differentiate into diazo-vesicles




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015656:632960:648234648234648551318Frankia symbiont of Datisca glomerata chromosome, complete genomehelix-turn-helix domain-containing protein9e-32135
NC_009380:1885024:189456118945611895238678Salinispora tropica CNB-440 chromosome, complete genomehelix-turn-helix domain-containing protein2e-26117
NC_009380:1491428:150234615023461503023678Salinispora tropica CNB-440 chromosome, complete genomehelix-turn-helix domain-containing protein2e-26117
NC_015312:1371530:138341913834191383727309Pseudonocardia dioxanivorans CB1190 chromosome, complete genomehelix-turn-helix domain-containing protein1e-1271.6
NC_013929:6526745:653658265365826536905324Streptomyces scabiei 87.22 chromosome, complete genomeDNA-binding protein2e-1167.8
NC_013947:656140:663636663636663941306Stackebrandtia nassauensis DSM 44728 chromosome, complete genometranscriptional regulator, XRE family6e-0752.8