Pre_GI: BLASTP Hits

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Query: NC_008271:119957:123132 Rhodococcus sp. RHA1 plasmid pRHL3, complete sequence

Start: 123132, End: 123350, Length: 219

Host Lineage: Rhodococcus jostii; Rhodococcus; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from soil contaminated with gamma-hexachlorocyclohexane (lindane: a toxic insecticide) in Japan. Polychlorinated biphenyl degrading bacterium. Rhodococcus jostii is capable of degrading a wide variety of polychlorinated biphenyls (PCBs), which are toxic compounds produced by industry, and is studied extensively for this reason. This microbe is being examined thoroughly under different environmental conditions in order to better understand metabolic pathways and gene functions.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015314:89815:103878103878104399522Pseudonocardia dioxanivorans CB1190 plasmid pPSED01, completeisoleucine patch superfamily enzyme, carbonic anhydrase/acetyltransferase1e-0652
NC_013172:3141739:316400031640003164518519Brachybacterium faecium DSM 4810, complete genomeisoleucine patch superfamily enzyme, carbonic anhydrase/acetyltransferase2e-0650.8
NC_014355:243543:265304265304265843540Candidatus Nitrospira defluvii, complete genomeputative transferase3e-0650.8
NC_003901:2533000:256477225647722565317546Methanosarcina mazei Go1, complete genomehypothetical protein9e-0648.9