Pre_GI: BLASTP Hits

Some Help

Query: NC_008269:577111:589036 Rhodococcus sp. RHA1 plasmid pRHL1, complete sequence

Start: 589036, End: 589572, Length: 537

Host Lineage: Rhodococcus jostii; Rhodococcus; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from soil contaminated with gamma-hexachlorocyclohexane (lindane: a toxic insecticide) in Japan. Polychlorinated biphenyl degrading bacterium. Rhodococcus jostii is capable of degrading a wide variety of polychlorinated biphenyls (PCBs), which are toxic compounds produced by industry, and is studied extensively for this reason. This microbe is being examined thoroughly under different environmental conditions in order to better understand metabolic pathways and gene functions.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008268:6149576:615316961531696153810642Rhodococcus sp. RHA1, complete genomepossible transcriptional regulator, TetR family6e-31133
NC_016111:6222461:6231155623115562325131359Streptomyces cattleya NRRL 8057, complete genomeKsbA4e-1270.9
NC_016109:116995:125292125292125933642Kitasatospora setae KM-6054, complete genomeputative gamma-butyrolactone receptor protein4e-1064.3
NC_003869:74836:778127781278402591Thermoanaerobacter tengcongensis MB4, complete genomeTranscriptional regulator1e-0962.8
NC_016113:887582:899764899764900378615Streptomyces cattleya NRRL 8057 plasmid pSCAT, complete sequenceprotein FarA1e-0859.3
NC_016111:6222461:624964762496476250315669Streptomyces cattleya NRRL 8057, complete genomeBarB1e-0859.3
NC_014209:81643:119504119504120079576Thermoanaerobacter mathranii subsp. mathranii str. A3 chromosome,transcriptional regulator, TetR family2e-0755.1
NC_015958:84270:861788617886756579Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genomeTetR family transcriptional regulator2e-0755.1
NC_014732:141000:141391141391141990600Halogeometricum borinquense DSM 11551 plasmid pHBOR04, completetranscriptional regulator, TetR family4e-0754.3
NC_017075:1674758:169781216978121698459648Rubrivivax gelatinosus IL144, complete genomeTetR family transcriptional regulator8e-0753.1
NC_013385:1064188:107194410719441072534591Ammonifex degensii KC4, complete genometranscriptional regulator, TetR family2e-0652.4
NC_016109:116995:120128120128120724597Kitasatospora setae KM-6054, complete genomeputative TetR family transcriptional regulator3e-0651.6