Pre_GI: BLASTP Hits

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Query: NC_008268:7485710:7501469 Rhodococcus sp. RHA1, complete genome

Start: 7501469, End: 7502104, Length: 636

Host Lineage: Rhodococcus jostii; Rhodococcus; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from soil contaminated with gamma-hexachlorocyclohexane (lindane: a toxic insecticide) in Japan. Polychlorinated biphenyl degrading bacterium. Rhodococcus jostii is capable of degrading a wide variety of polychlorinated biphenyls (PCBs), which are toxic compounds produced by industry, and is studied extensively for this reason. This microbe is being examined thoroughly under different environmental conditions in order to better understand metabolic pathways and gene functions.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008268:7485710:750717975071797507808630Rhodococcus sp. RHA1, complete genomeprobable transcriptional regulator, TetR family1e-64245
NC_007509:309348:317129317129317758630Burkholderia sp. 383 chromosome 3, complete sequencetranscriptional regulator, TetR family1e-0963.2
NC_014976:627935:639581639581640174594Bacillus subtilis BSn5 chromosome, complete genomeTetR family transcriptional regulator1e-0859.7
NC_010397:815549:830731830731831375645Mycobacterium abscessus chromosome Chromosome, complete sequencePutative transcriptional regulator, TetR family3e-0755.5
NC_015312:2278566:231704523170452317632588Pseudonocardia dioxanivorans CB1190 chromosome, complete genomeTetR family transcriptional regulator3e-0652
NC_007509:309348:315944315944316543600Burkholderia sp. 383 chromosome 3, complete sequencetranscriptional regulator, TetR family4e-0651.2
NC_020126:9938287:994167999416799942269591Myxococcus stipitatus DSM 14675, complete genomeTetR family transcriptional regulator7e-0650.4