Pre_GI: BLASTP Hits

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Query: NC_008268:6149576:6174142 Rhodococcus sp. RHA1, complete genome

Start: 6174142, End: 6174792, Length: 651

Host Lineage: Rhodococcus jostii; Rhodococcus; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from soil contaminated with gamma-hexachlorocyclohexane (lindane: a toxic insecticide) in Japan. Polychlorinated biphenyl degrading bacterium. Rhodococcus jostii is capable of degrading a wide variety of polychlorinated biphenyls (PCBs), which are toxic compounds produced by industry, and is studied extensively for this reason. This microbe is being examined thoroughly under different environmental conditions in order to better understand metabolic pathways and gene functions.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008596:6009511:604224360422436042911669Mycobacterium smegmatis str. MC2 155, complete genomeGlcNAc-PI de-N-acetylase family protein4e-84310
NC_013757:368973:398275398275398982708Geodermatophilus obscurus DSM 43160, complete genomeLmbE family protein7e-50196
NC_020453:3179346:320195132019513202604654Agromonas oligotrophica S58 DNA, complete genomehypothetical protein6e-42170
NC_017506:1996652:201266520126652013273609Marinobacter adhaerens HP15 chromosome, complete genomeN-acetylglucosaminyl phosphatidylinositol deacetylase1e-32139
NC_015160:1117371:112051111205111121146636Odoribacter splanchnicus DSM 20712 chromosome, complete genomeLmbE family protein2e-1065.9
NC_012804:2017531:204337120433712044105735Thermococcus gammatolerans EJ3, complete genomeN-acetylglucosaminylphosphatidylinositol deacetylase, putative (Pigl)5e-1064.3
NC_011832:820658:860652860652861281630Candidatus Methanosphaerula palustris E1-9c, complete genomeLmbE family protein3e-0962
NC_014618:1040381:104686310468631047510648Enterobacter cloacae SCF1 chromosome, complete genomeLmbE family protein1e-0859.7
NC_003552:3058523:305852330585233059452930Methanosarcina acetivorans C2A, complete genomehypothetical protein9e-0857
NC_014640:6745873:675330267533026753934633Achromobacter xylosoxidans A8 chromosome, complete genomeN-acetyl glucosamine deacetylase family protein8e-0753.9