Pre_GI: BLASTP Hits

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Query: NC_008268:3418000:3438009 Rhodococcus sp. RHA1, complete genome

Start: 3438009, End: 3438875, Length: 867

Host Lineage: Rhodococcus jostii; Rhodococcus; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from soil contaminated with gamma-hexachlorocyclohexane (lindane: a toxic insecticide) in Japan. Polychlorinated biphenyl degrading bacterium. Rhodococcus jostii is capable of degrading a wide variety of polychlorinated biphenyls (PCBs), which are toxic compounds produced by industry, and is studied extensively for this reason. This microbe is being examined thoroughly under different environmental conditions in order to better understand metabolic pathways and gene functions.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008268:3233961:324269932426993243568870Rhodococcus sp. RHA1, complete genomeprobable senescence marker protein-303e-91335
NC_010625:1415500:144564014456401446470831Burkholderia phymatum STM815 plasmid pBPHY01, complete sequenceSMP-30/Gluconolaconase/LRE domain protein3e-49195
NC_008268:7180663:720604472060447206943900Rhodococcus sp. RHA1, complete genome5-valerolactone hydrolase9e-44177
NC_015656:3200500:321980732198073220694888Frankia symbiont of Datisca glomerata chromosome, complete genomeSMP-30/gluconolaconase/LRE-like region-containing protein1e-43176
NC_008541:2037793:204063420406342041542909Arthrobacter sp. FB24 chromosome 1, complete sequenceSMP-30/Gluconolaconase/LRE domain protein6e-43174
NC_014830:335380:357682357682358581900Intrasporangium calvum DSM 43043 chromosome, complete genomegluconolactonase2e-38159
NC_015312:1893945:189960018996001900451852Pseudonocardia dioxanivorans CB1190 chromosome, complete genomeSMP-30/Gluconolaconase/LRE-like region-containing protein9e-33140
NC_010545:11950:288572885729753897Corynebacterium urealyticum DSM 7109, complete genomehypothetical protein9e-28124
NC_007953:1434705:143724314372431438127885Burkholderia xenovorans LB400 chromosome 3, complete sequenceputative senescence marker protein-30 (SMP-30)3e-1376.3
NC_017955:3006500:301042430104243011266843Modestobacter marinus, complete genomegluconolactonase7e-1271.2
NC_016642:1990684:2006015200601520077391725Pseudovibrio sp. FO-BEG1 chromosome, complete genomeSMP-30/Gluconolaconase/LRE-like region2e-0860.1
NC_019904:334654:337464337464338357894Echinicola vietnamensis DSM 17526 chromosome, complete genomegluconolactonase1e-0653.9
NC_008596:4043213:407896640789664079841876Mycobacterium smegmatis str. MC2 155, complete genomecalcium-binding protein3e-0652.8
NC_008095:3785848:380368138036813804574894Myxococcus xanthus DK 1622, complete genomesenescence marker protein-30 family protein7e-0651.6