Pre_GI: BLASTP Hits

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Query: NC_008268:3335035:3349255 Rhodococcus sp. RHA1, complete genome

Start: 3349255, End: 3350466, Length: 1212

Host Lineage: Rhodococcus jostii; Rhodococcus; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from soil contaminated with gamma-hexachlorocyclohexane (lindane: a toxic insecticide) in Japan. Polychlorinated biphenyl degrading bacterium. Rhodococcus jostii is capable of degrading a wide variety of polychlorinated biphenyls (PCBs), which are toxic compounds produced by industry, and is studied extensively for this reason. This microbe is being examined thoroughly under different environmental conditions in order to better understand metabolic pathways and gene functions.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014830:1252249:1287378128737812885531176Intrasporangium calvum DSM 43043 chromosome, complete genometranscriptional regulator, CdaR7e-1995.1
NC_013595:3361505:3379570337957033806551086Streptosporangium roseum DSM 43021, complete genometranscriptional regulator, CdaR3e-1686.7
NC_016111:4645145:4661683466168346628341152Streptomyces cattleya NRRL 8057, complete genometranscriptional regulator2e-0963.9