Pre_GI: BLASTP Hits

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Query: NC_008268:3162824:3171624 Rhodococcus sp. RHA1, complete genome

Start: 3171624, End: 3172856, Length: 1233

Host Lineage: Rhodococcus jostii; Rhodococcus; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from soil contaminated with gamma-hexachlorocyclohexane (lindane: a toxic insecticide) in Japan. Polychlorinated biphenyl degrading bacterium. Rhodococcus jostii is capable of degrading a wide variety of polychlorinated biphenyls (PCBs), which are toxic compounds produced by industry, and is studied extensively for this reason. This microbe is being examined thoroughly under different environmental conditions in order to better understand metabolic pathways and gene functions.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_018681:5551000:5571451557145155726591209Nocardia brasiliensis ATCC 700358 chromosome, complete genometransposase3e-130465
NC_013929:10133902:1014000910140009101411691161Streptomyces scabiei 87.22 chromosome, complete genomehypothetical protein1e-51203
NC_009328:3504454:3529966352996635311051140Geobacillus thermodenitrificans NG80-2 chromosome, complete genometransposition regulatory protein TnpA8e-1375.1
NC_009328:2161116:2201942220194222030811140Geobacillus thermodenitrificans NG80-2 chromosome, complete genometransposition regulatory protein TnpA8e-1375.1
NC_008271:119957:1382081382081393381131Rhodococcus sp. RHA1 plasmid pRHL3, complete sequenceprobable integrase/recombinase, XerC and XerD family2e-1170.9
NC_008705:1790222:1820156182015618212501095Mycobacterium sp. KMS, complete genomephage integrase family protein1e-1067.8
NC_010572:3878660:3886592388659238877821191Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative phage integrase2e-1067
NC_014550:7560:2566025660270091350Arthrobacter arilaitensis Re117, complete genome1e-0654.7