Pre_GI: BLASTP Hits

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Query: NC_008261:421000:423044 Clostridium perfringens ATCC 13124, complete genome

Start: 423044, End: 424579, Length: 1536

Host Lineage: Clostridium perfringens; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: The species type strain, originally isolated from a human gas gangrene patient. Causative agent of gas gangrene. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Known opportunistic toxin-producing pathogens in animals and humans. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. This organism is a causative agent of a wide spectrum of necrotic enterotoxicoses. It also causes such animal diseases as lamb dysentery, ovine enterotoxemia (struck), pulpy kidney disease in lambs and other enterotoxemias in lambs and calves. It is commonly found in the environment (soil, sewage) and in the animal and human gastrointestinal tract as a member of the normal microflora. It is a fast growing (generation time 8-10 min) anaerobic flesh-eater. Active fermentative growth is accompanied by profuse generation of molecular hydrogen and carbon dioxide. It is also oxygen tolerant which makes it an easy object to work with in laboratories. C. perfringens have been developed and the species became a model organism in clostridial genetic studies. Known isolates belong to five distinct types (A, B, C, D, and E) that are distinguished based on the specific extracellular toxins they produce. Known isolates belong to five distinct types (A, B, C, D, and E) that are distinguished based on the specific extracellular toxins they produce. All types produce the alpha toxin (phospholipase C). Type A strains that cause gas gangrene produce alpha toxin, theta (hemolysin), kappa (collagenase), mu (hyaluronidase), nu (DNAse) and neuraminidase which are all the enzymatic factors aiding the bacterium in invading and destruction of the host tissues. Type C strains produce alpha toxin, beta toxin and prefringolysin enteritis. In addition to alpha toxin, Type B strains produce beta toxin, types B and D produce the pore forming epsilon toxin and type E strains produce iota toxin.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_003366:461602:4662774662774678121536Clostridium perfringens str. 13, complete genomecardiolipin synthase0954
NC_016627:2524307:2544478254447825460161539Clostridium clariflavum DSM 19732 chromosome, complete genomephosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase8e-158557
NC_017295:3472797:3488423348842334899551533Clostridium acetobutylicum EA 2018 chromosome, complete genomeputative cardiolipin synthase (phospholipase D family)8e-150530
NC_019903:1058657:1058657105865710601861530Desulfitobacterium dichloroeliminans LMG P-21439 chromosome,phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase1e-147523
NC_014833:3667748:3677827367782736794461620Ruminococcus albus 7 chromosome, complete genomephospholipase D/transphosphatidylase2e-122439
NC_015977:2966971:2978392297839229799511560Roseburia hominis A2-183 chromosome, complete genomecardiolipin synthase3e-104379
NC_015977:3215770:3256002325600232575611560Roseburia hominis A2-183 chromosome, complete genomecardiolipin synthase3e-104379
NC_014622:5251000:5270699527069952722101512Paenibacillus polymyxa SC2 chromosome, complete genomephospholipase d/transphosphatidylase3e-72273
NC_013132:893849:9110869110869125641479Chitinophaga pinensis DSM 2588, complete genomephospholipase D/Transphosphatidylase2e-62240
NC_014393:3494863:3517034351703435184791446Clostridium cellulovorans 743B chromosome, complete genomephospholipase D/Transphosphatidylase7e-57221
NC_008262:101731:1053771053771067891413Clostridium perfringens SM101, complete genomecardiolipin synthetase4e-55216
NC_003366:64908:9206292062935041443Clostridium perfringens str. 13, complete genomeprobable cardiolipin synthase6e-55215
NC_016630:864601:8937008937008951811482Filifactor alocis ATCC 35896 chromosome, complete genomecardiolipin synthase6e-54212
NC_014507:1373325:1385037138503713865151479Methanoplanus petrolearius DSM 11571 chromosome, complete genomephospholipase D/transphosphatidylase1e-53211
NC_015978:1266196:1285223128522312866321410Lactobacillus sanfranciscensis TMW 1.1304 chromosome, completeCardiolipin synthetase7e-53208
NC_004557:1:2487248739231437Clostridium tetani E88, complete genomeputative cardiolipin synthetase 25e-52205
NC_004557:2777291:2487248739231437Clostridium tetani E88, complete genomeputative cardiolipin synthetase 25e-52205
NC_015913:178451:1964541964541979201467Candidatus Arthromitus sp. SFB-mouse-Japan, complete genomecardiolipin synthase3e-51202
NC_017294:758992:7589927589927604401449Candidatus Arthromitus sp. SFB-mouse-Yit, complete genomeputative cardiolipin synthase5e-51202
NC_014011:962474:9812899812899828751587Aminobacterium colombiense DSM 12261 chromosome, complete genomephospholipase D/Transphosphatidylase3e-49196
NC_013517:2437574:2457769245776924592651497Sebaldella termitidis ATCC 33386, complete genomephospholipase D/Transphosphatidylase3e-48193
NC_010322:6037566:6042477604247760439161440Pseudomonas putida GB-1 chromosome, complete genomecardiolipin synthetase7e-47188
NC_016012:135500:1535261535261549921467Candidatus Arthromitus sp. SFB-rat-Yit, complete genomecardiolipin synthetase3e-46186
NC_021171:4674086:4688431468843146896391209Bacillus sp. 1NLA3E, complete genomecardiolipin synthetase domain-containing protein2e-45184
NC_015733:5909821:5909821590982159112601440Pseudomonas putida S16 chromosome, complete genomecardiolipin synthetase1e-44181
NC_011071:10842:1342113421148811461Stenotrophomonas maltophilia R551-3, complete genomephospholipase D/Transphosphatidylase1e-43178
NC_003272:5040500:5059332505933250607741443Nostoc sp. PCC 7120, complete genomecardiolipin synthetase1e-42174
NC_010943:9294:1315713157146171461Stenotrophomonas maltophilia K279a, complete genomeputative cardiolipin synthetase2e-42174
NC_002570:3911153:3925822392582239270181197Bacillus halodurans C-125, complete genomecardiolipin synthetase3e-42173
NC_015723:1347946:1358735135873513600301296Cupriavidus necator N-1 chromosome 2, complete sequencecardiolipin synthase Cls4e-42172
NC_017190:3879148:3896550389655038980431494Bacillus amyloliquefaciens LL3 chromosome, complete genomecardiolipin synthetase3e-40166
NC_017190:2002718:2009583200958320110761494Bacillus amyloliquefaciens LL3 chromosome, complete genomecardiolipin synthetase3e-40166
NC_014551:3864127:3881529388152938830221494Bacillus amyloliquefaciens DSM 7, complete genomecardiolipin synthetase3e-40166
NC_014551:2057971:2064821206482120663141494Bacillus amyloliquefaciens DSM 7, complete genomecardiolipin synthetase3e-40166
NC_011761:1499500:1504835150483515062111377Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completephospholipase D3e-40166
NC_015222:1843093:1849790184979018511871398Nitrosomonas sp. AL212 chromosome, complete genomephospholipase D/Transphosphatidylase2e-39164
NC_015942:2060349:2064507206450720658441338Acidithiobacillus ferrivorans SS3 chromosome, complete genomephospholipase D/transphosphatidylase1e-39164
NC_007969:2885249:2916935291693529183741440Psychrobacter cryohalolentis K5, complete genomephospholipase D/Transphosphatidylase5e-39162
NC_011206:1379068:1390424139042413917611338Acidithiobacillus ferrooxidans ATCC 53993, complete genomephospholipase D/Transphosphatidylase2e-38160
NC_014751:225477:2272222272222287511530Mycoplasma leachii PG50 chromosome, complete genomephospholipase D domain protein2e-37157
NC_011883:2826000:2841201284120128426191419Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,phospholipase D/Transphosphatidylase3e-36153
NC_011283:2185462:2187776218777621892361461Klebsiella pneumoniae 342 chromosome, complete genomecardiolipin synthetase4e-36153
NC_013850:2103469:2121320212132021227801461Klebsiella variicola At-22 chromosome, complete genomephospholipase D/Transphosphatidylase4e-36153
NC_013166:1409790:1415554141555414166871134Kangiella koreensis DSM 16069, complete genomephospholipase D/Transphosphatidylase6e-36152
NC_004088:2227278:2240946224094622424271482Yersinia pestis KIM, complete genomecardiolipin synthetase9e-36151
NC_008149:1842500:1873334187333418747941461Yersinia pestis Nepal516, complete genomecardiolipin synthetase1e-35151
NC_010159:2252380:2253916225391622553761461Yersinia pestis Angola, complete genomecardiolipin synthetase1e-35151
NC_008150:1705152:1736673173667317381331461Yersinia pestis Antiqua, complete genomecardiolipin synthetase1e-35151
NC_009381:1064227:1070699107069910721591461Yersinia pestis Pestoides F chromosome, complete genomecardiolipin synthetase1e-35151
NC_009708:2245586:2252731225273122541911461Yersinia pseudotuberculosis IP 31758 chromosome, complete genomecardiolipin synthetase1e-35151
NC_014029:2138000:2147333214733321487931461Yersinia pestis Z176003 chromosome, complete genomecardiolipin synthetase1e-35151
NC_017160:2054289:2074925207492520763851461Yersinia pestis D182038 chromosome, complete genomecardiolipin synthetase1e-35151
NC_017168:3290380:3296223329622332976831461Yersinia pestis A1122 chromosome, complete genomecardiolipin synthetase1e-35151
NC_017265:1765399:1779847177984717813071461Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,cardiolipin synthase 11e-35151
NC_010465:2282874:2290018229001822914781461Yersinia pseudotuberculosis YPIII, complete genomephospholipase D/Transphosphatidylase2e-35150
NC_009778:1477841:1497538149753814989981461Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein3e-35150
NC_020260:1535394:1556443155644315579031461Cronobacter sakazakii Sp291, complete genomecardiolipin synthetase3e-35150
NC_014121:1653385:1671249167124916727091461Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completecardiolipin synthetase5e-35149
NC_014640:4951076:4964407496440749659001494Achromobacter xylosoxidans A8 chromosome, complete genomephospholipase D9e-35148
NC_013364:1596278:1600564160056416020241461Escherichia coli O111:H- str. 11128, complete genomecardiolipin synthase 12e-34147
NC_009801:1392696:1396047139604713975071461Escherichia coli E24377A, complete genomecardiolipin synthetase2e-34147
NC_007384:2007467:2027644202764420291041461Shigella sonnei Ss046, complete genomecardiolipin synthase, a major membrane phospholipid; novobiocin sensitivity2e-34147
NC_014550:2835696:2857039285703928585111473Arthrobacter arilaitensis Re117, complete genomeputative cardiolipin synthase2e-34147
NC_020063:2011019:2012254201225420137141461Enterobacteriaceae bacterium strain FGI 57, complete genomephosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase3e-34146
NC_007606:1209132:1211563121156312130231461Shigella dysenteriae Sd197, complete genomecardiolipin synthase4e-34146
NC_007712:2287053:2287053228705322885131461Sodalis glossinidius str. 'morsitans', complete genomecardiolipin synthase1e-33145
NC_009667:1371924:1399666139966614011261461Ochrobactrum anthropi ATCC 49188 chromosome 1, complete sequencephospholipase D/transphosphatidylase9e-34145
NC_017030:158947:1603591603591615461188Corallococcus coralloides DSM 2259 chromosome, complete genomecardiolipin synthase6e-33142
NC_014837:2354241:2372059237205923735191461Pantoea sp. At-9b chromosome, complete genomephospholipase D/transphosphatidylase7e-33142
NC_012918:1660477:1663006166300616641931188Geobacter sp. M21 chromosome, complete genomephospholipase D/transphosphatidylase1e-32141
NC_008048:389645:3983633983633997661404Sphingopyxis alaskensis RB2256, complete genomephospholipase D/Transphosphatidylase2e-32140
NC_016027:1851737:1866178186617818676081431Gluconacetobacter xylinus NBRC 3288, complete genomephospholipase D2e-32140
NC_011146:3206000:3224504322450432256911188Geobacter bemidjiensis Bem, complete genomephospholipase D/Transphosphatidylase7e-32139
NC_010084:2484000:2505426250542625068561431Burkholderia multivorans ATCC 17616 chromosome 1, completephospholipase D/transphosphatidylase9e-32138
NC_010804:996837:1017917101791710193471431Burkholderia multivorans ATCC 17616 chromosome 1, completecardiolipin synthase9e-32138
NC_012779:1629731:1634011163401116354711461Edwardsiella ictaluri 93-146, complete genomecardiolipin synthetase3e-31137
NC_016616:1534983:1556447155644715578771431Dechlorosoma suillum PS chromosome, complete genomephosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase5e-31135
NC_014623:8763551:8783131878313187843961266Stigmatella aurantiaca DW4/3-1 chromosome, complete genomesimialr to cardiolipin synthetase domain-containing protein7e-31135
NC_013173:1259898:1294115129411512953921278Desulfomicrobium baculatum DSM 4028, complete genomephospholipase D/Transphosphatidylase9e-31135
NC_016513:1529691:1532716153271615341731458Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completecardiolipin synthetase2e-30134
NC_017030:3668146:3683855368385536854111557Corallococcus coralloides DSM 2259 chromosome, complete genomecardiolipin synthase4e-30133
NC_008686:1960034:1989186198918619906131428Paracoccus denitrificans PD1222 chromosome 1, complete sequencephospholipase D/Transphosphatidylase3e-29130
NC_007759:512477:5147015147015161791479Syntrophus aciditrophicus SB, complete genomecardiolipin synthetase4e-29129
NC_002488:1157684:1157684115768411590871404Xylella fastidiosa 9a5c, complete genomecardiolipin synthase6e-29129
NC_007645:2181739:2183363218336321845321170Hahella chejuensis KCTC 2396, complete genomePhosphatidylserine/phosphatidylglycerophosphate/ c ardiolipin synthases and related enzyme7e-29129
NC_010571:637398:6747776747776763211545Opitutus terrae PB90-1, complete genomecardiolipin synthetase1e-28128
NC_014643:1251847:1278592127859212800701479Rothia dentocariosa ATCC 17931 chromosome, complete genomecardiolipin synthetase9e-29128
NC_014910:3727887:3758615375861537600181404Alicycliphilus denitrificans BC chromosome, complete genomephospholipase d/transphosphatidylase7e-27122
NC_003888:7866148:7870734787073478719211188Streptomyces coelicolor A3(2), complete genomephospholipase1e-26121
NC_007005:4810295:4828329482832948294861158Pseudomonas syringae pv. syringae B728a, complete genomePhospholipase D/Transphosphatidylase4e-24113
NC_005085:4335333:4369548436954843710651518Chromobacterium violaceum ATCC 12472, complete genomeprobable phosphatidylglycerol phosphate synthetase2e-23111
NC_015222:2089767:2089767208976720909391173Nitrosomonas sp. AL212 chromosome, complete genomephospholipase D/Transphosphatidylase5e-21102
NC_020304:1097478:1099175109917511003381164Desulfocapsa sulfexigens DSM 10523, complete genomephosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase1e-20101
NC_012997:4491871:4512967451296745142621296Teredinibacter turnerae T7901, complete genomephospholipase D catalytic domain protein3e-1997.1
NC_010170:5087742:5111204511120451124151212Bordetella petrii, complete genomeputative phospholipase5e-1996.3
NC_004129:5481629:5483331548333154845241194Pseudomonas fluorescens Pf-5, complete genomephospholipase family protein6e-1995.9
NC_002927:118982:1189821189821201931212Bordetella bronchiseptica RB50, complete genomeputative phospholipase3e-1894
NC_017047:3907854:3934403393440339356501248Rahnella aquatilis HX2 chromosome, complete genomecardiolipin synthase 23e-1893.6
NC_015061:3840463:3866989386698938682361248Rahnella sp. Y9602 chromosome, complete genomephospholipase D/Transphosphatidylase3e-1893.6
NC_002928:123126:1231261231261243881263Bordetella parapertussis 12822, complete genomeputative phospholipase7e-1892.4
NC_013889:1202385:1218087121808712196491563Thioalkalivibrio sp. K90mix chromosome, complete genomephospholipase D/Transphosphatidylase7e-1789.4
NC_021150:2451500:2478928247892824800191092Azotobacter vinelandii CA6, complete genomecardiolipin synthase 25e-1789.4
NC_012560:2451500:2478916247891624800071092Azotobacter vinelandii DJ, complete genomePhospholipase D/Transphosphatidylase5e-1789.4
NC_010552:752007:7739707739707755201551Burkholderia ambifaria MC40-6 chromosome 2, complete sequencephospholipase D/Transphosphatidylase7e-1685.9
NC_010644:517211:5370385370385390712034Elusimicrobium minutum Pei191, complete genomephosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase-like protein4e-1583.6
NC_020541:2694836:2715963271596327175071545Rhodanobacter sp. 2APBS1, complete genomephosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase2e-1377.4
NC_015977:3215770:3252347325234732537801434Roseburia hominis A2-183 chromosome, complete genomehypothetical protein9e-1375.5
NC_015977:2966971:2974736297473629761691434Roseburia hominis A2-183 chromosome, complete genomehypothetical protein9e-1375.5
NC_017986:2548720:2548720254872025502551536Pseudomonas putida ND6 chromosome, complete genomephospholipase D/transphosphatidylase1e-1171.6
NC_014306:1810548:1810548181054818120201473Erwinia billingiae Eb661, complete genomePutative phospholipase YmdC3e-1170.1
NC_014640:6745873:6785825678582567870361212Achromobacter xylosoxidans A8 chromosome, complete genomephospholipase D5e-1169.7
NC_010611:3381500:3396901339690133985261626Acinetobacter baumannii ACICU, complete genomePhosphatidylserine/phosphatidylglycerophosphate/ cardioli pin synthase6e-1169.3
NC_010410:513298:5141085141085157391632Acinetobacter baumannii AYE, complete genomeputative phospholipase D protein6e-1169.3
NC_014965:2200974:2220927222092722224021476Vibrio vulnificus MO6-24/O chromosome I, complete sequencecardiolipin synthetase5e-0962.8