Pre_GI: BLASTP Hits

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Query: NC_008258:1076922:1078450 Shigella flexneri 5 str. 8401, complete genome

Start: 1078450, End: 1079775, Length: 1326

Host Lineage: Shigella flexneri; Shigella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This genus is named for the Japanese scientist (Shiga) who discovered them in the 1890s. They are closely related to the Escherichia group, and may be considered the same species. Shigella spp. are human-specific pathogens that are transmitted via contaminated food and water and are the leading causes of endemic bacillary dysentery, and over 1 million deaths worldwide are attributed to them. The bacteria infect the epithelial lining of the colon, causing acute inflammation by entering the host cell cytoplasm and spreading intercellularly. are extremely virulent organisms that require very few cells in order to cause disease. Both the type III secretion system, which delivers effector molecules into the host cell, and some of the translocated effectors such as the invasion plasmid antigens (Ipas), are encoded on the plasmid. The bacterium produces a surface protein that localizes to one pole of the cell (IcsA) which binds to and promotes actin polymerization, resulting in movement of the bacterium through the cell cytoplasm, and eventually to neighboring cells, which results in inflammatory destruction of the mucosal lining. This organism, along with Shigella sonnei, is the major cause of shigellosis in industrialized countries and is responsible for endemic infections.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_000913:1087062:1085744108574410870691326Escherichia coli K12, complete genomepredicted glycosyl transferase0816
AC_000091:1083798:1086943108694310882681326Escherichia coli W3110 DNA, complete genomepredicted glycosyl transferase0816
NC_007946:1073135:1073135107313510744601326Escherichia coli UTI89, complete genomehypothetical protein YcdQ0815
NC_004431:1119700:1119700111970011210251326Escherichia coli CFT073, complete genomeHypothetical protein ycdQ0815
NC_013941:1314158:1314158131415813154831326Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeBiofilm PGA synthesis N-glycosyltransferase pgaC0813
NC_013008:1271621:1272036127203612733611326Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeN-glycosyltransferase0810
NC_002655:1413244:1413244141324414145691326Escherichia coli O157:H7 EDL933, complete genomehypothetical protein0810
NC_002695:1329472:1329472132947213307971326Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein0810
NC_010468:2809125:2821972282197228232101239Escherichia coli ATCC 8739, complete genomeglycosyl transferase family 20787
NC_011353:1271335:1271750127175012729881239Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeN-glycosyltransferase0780
NC_017387:1110412:1133389113338911345701182Acinetobacter baumannii TCDC-AB0715 chromosome, complete genomeN-glycosyltransferase3e-103375
NC_011999:728353:7325187325187337621245Macrococcus caseolyticus JCSC5402, complete genomeintercellular adhesion protein IcaA homolog2e-81303
NC_020450:875757:8757578757578770851329Lactococcus lactis subsp. lactis IO-1 DNA, complete genomeglycosyl transferase8e-40165
NC_008525:108687:1126321126321139571326Pediococcus pentosaceus ATCC 25745, complete genomeGlycosyltransferase3e-39163
NC_013891:353625:3692133692133705201308Listeria seeligeri serovar 1/2b str. SLCC3954, complete genomeglycosyl transferase, family 2 protein4e-39162
NC_003888:4927170:4971401497140149736322232Streptomyces coelicolor A3(2), complete genomebi-functional transferase/deacetylase3e-27123
NC_018870:757416:7975377975377988921356Thermacetogenium phaeum DSM 12270 chromosome, complete genomepoly-beta-1,6-N-acetyl-D-glucosamine synthase IcaA3e-22107
NC_013093:1411882:1435129143512914370421914Actinosynnema mirum DSM 43827, complete genomeglycosyl transferase family 24e-22106
NC_019673:1584739:1587871158787115898171947Saccharothrix espanaensis DSM 44229 complete genomeGlycosyltransferase, family 22e-21103
NC_006270:4048876:4070623407062340721221500Bacillus licheniformis ATCC 14580, complete genomeGlycosyl transferase, family 28e-2098.6
NC_006322:4048990:4070737407073740722361500Bacillus licheniformis ATCC 14580, complete genomeYdaM8e-2098.6
NC_020389:1683120:1708944170894417110342091Methanosarcina mazei Tuc01, complete genomeglycosyltransferase1e-1998.2
NC_015594:579354:5779245779245793571434Sphingobium chlorophenolicum L-1 chromosome chromosome 2, completefamily 2 glycosyl transferase2e-1790.9
NC_015474:983468:9939969939969950571062Pyrococcus sp. NA2 chromosome, complete genomeputative glycosyl transferase3e-1790.1
NC_009089:1202261:1202261120226112035171257Clostridium difficile 630, complete genomeputative glycosyl transferase3e-1790.1
NC_011295:33500:3958939589409351347Coprothermobacter proteolyticus DSM 5265, complete genomechitin synthase7e-1789
NC_013316:1081044:1081044108104410823001257Clostridium difficile R20291, complete genomeputative glycosyl transferase3e-1686.7
NC_015435:1713051:1721557172155717227441188Metallosphaera cuprina Ar-4 chromosome, complete genomeglycosyl transferase family protein1e-1585.1
NC_007677:324000:3387473387473400511305Salinibacter ruber DSM 13855, complete genomeglycosyl transferase, group 2 family protein3e-1480.1
NC_010511:3674178:3739889373988937413401452Methylobacterium sp. 4-46 chromosome, complete genomeglycosyl transferase family protein1e-1378.2
NC_016628:763833:7767367767367779111176Vibrio furnissii NCTC 11218 chromosome 2, complete sequencechitin synthase6e-1375.9
NC_014960:72737:8533585335865071173Anaerolinea thermophila UNI-1, complete genomeputative glycosyltransferase4e-1273.2
NC_004463:5110709:5110709511070951133782670Bradyrhizobium japonicum USDA 110, complete genomebeta-(1-3)-glucosyl transferase5e-1272.8
NC_015167:724934:7263757263757278081434Cellulophaga lytica DSM 7489 chromosome, complete genomeHyaluronan synthase9e-1272
NC_017295:2630179:2630179263017926315221344Clostridium acetobutylicum EA 2018 chromosome, complete genomeGlycosyltransferase1e-1171.6
NC_015687:2632557:2632557263255726339001344Clostridium acetobutylicum DSM 1731 chromosome, complete genomeglycosyltransferase1e-1171.6
NC_003030:2630931:2630931263093126322741344Clostridium acetobutylicum ATCC 824, complete genomeGlycosyltransferase1e-1171.6
NC_015850:510837:5277255277255291761452Acidithiobacillus caldus SM-1 chromosome, complete genomeglycosyl transferase family protein3e-1170.1
NC_014972:3000138:3008285300828530109002616Desulfobulbus propionicus DSM 2032 chromosome, complete genomefamily 2 glycosyl transferase2e-1067
NC_020450:614637:6312006312006325161317Lactococcus lactis subsp. lactis IO-1 DNA, complete genomeglycosyl transferase, family 27e-1065.5
NC_011658:5007691:5027254502725450283151062Bacillus cereus AH187 chromosome, complete genomeN-acetylglucosaminyltransferase2e-0964.3
NC_020054:2801371:2801371280137128038752505Fibrella aestuarina BUZ 2 drat genomecellulose synthase (UDP-forming)3e-0963.5
NC_014032:269844:305869305869306819951Salinibacter ruber M8 chromosome, complete genomefamily 2 glycosyl transferase4e-0963.2
NC_007604:1442500:1447847144784714500692223Synechococcus elongatus PCC 7942, complete genomeCellulose synthase (UDP-forming)4e-0963.2
NC_006576:161112:1707301707301729522223Synechococcus elongatus PCC 6301, complete genomeUDP-glucose-beta-D-glucan glucosyltransferase4e-0963.2
NC_013204:2826500:2857578285757828586511074Eggerthella lenta DSM 2243, complete genomeglycosyl transferase family 25e-0962.8
NC_020126:5777895:5796780579678057980691290Myxococcus stipitatus DSM 14675, complete genomegroup 2 glycosyl transferase7e-0962.4
NC_008825:747756:7530147530147540631050Methylibium petroleiphilum PM1, complete genomeputative glycosyltransferase protein7e-0962.4
NC_010602:2911823:2932700293270029342411542Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'glycosyltransferase1e-0861.6
NC_010842:2919108:2941086294108629426271542Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)' chromosomeGlycosyltransferase plus another conserved domain1e-0861.6
NC_006576:2073163:2080676208067620828892214Synechococcus elongatus PCC 6301, complete genomeUDP-glucose-beta-D-glucan glucosyltransferase1e-0861.6
NC_007604:2213659:2234141223414122363542214Synechococcus elongatus PCC 7942, complete genomeCellulose synthase (UDP-forming)1e-0861.6
NC_008095:4061899:4064921406492140661741254Myxococcus xanthus DK 1622, complete genomeglycosyl transferase, group 21e-0861.2
NC_013410:3280039:331610233161023317058957Fibrobacter succinogenes subsp. succinogenes S85 chromosome,family 2 glycosyl transferase1e-0861.2
NC_015711:5969061:5972082597208259732571176Myxococcus fulvus HW-1 chromosome, complete genomegroup 2 glycosyl transferase2e-0861.2
NC_018691:1864796:1884227188422718880033777Alcanivorax dieselolei B5 chromosome, complete genomeCapsule polysaccharide modification protein LipA2e-0860.8
NC_013204:799857:8084578084578094581002Eggerthella lenta DSM 2243, complete genomeglycosyl transferase family 22e-0860.8
NC_014650:376070:3885773885773897491173Geobacillus sp. Y4.1MC1 chromosome, complete genomefamily 2 glycosyl transferase2e-0860.8
NC_013037:5536433:555281255528125553735924Dyadobacter fermentans DSM 18053, complete genomeglycosyl transferase family 24e-0859.7
NC_002516:776787:778309778309779208900Pseudomonas aeruginosa PAO1, complete genomeprobable glycosyl transferase4e-0859.7
NC_013165:1407000:1417648141764814186791032Slackia heliotrinireducens DSM 20476, complete genomeglycosyl transferase5e-0859.3
NC_009483:1936486:1951821195182119529181098Geobacter uraniireducens Rf4 chromosome, complete genomeglycosyl transferase family protein5e-0859.3
NC_009831:2884851:289670128967012897642942Shewanella sediminis HAW-EB3, complete genomeglycosyltransferase, group 2 family protein5e-0859.3
NC_010162:1222000:1225267122526712263911125Sorangium cellulosum 'So ce 56', complete genomeglycosyltransferase5e-0859.3
NC_009615:2590207:260268626026862603663978Parabacteroides distasonis ATCC 8503 chromosome, complete genomeglycosyl transferase family protein6e-0858.9
NC_015571:411156:4261744261744272141041Porphyromonas gingivalis TDC60, complete genomeputative glycosyl transferase family 21e-0758.5
NC_016776:4115889:411669841166984117606909Bacteroides fragilis 638R, complete genomeputative LPS biosynthesis glycosyltransferase9e-0858.5
NC_018645:2492779:2498612249861224997781167Desulfobacula toluolica Tol2, complete genomeglycosyl transferase9e-0858.5
NC_011884:1541256:1563457156345715646531197Cyanothece sp. PCC 7425, complete genomeglycosyl transferase family 21e-0757.8
NC_017095:1927118:1938833193883319398821050Fervidobacterium pennivorans DSM 9078 chromosome, complete genomeglycosyl transferase family protein1e-0757.8
NC_011027:1971580:1987613198761319891301518Chlorobaculum parvum NCIB 8327, complete genomeglycosyl transferase family 21e-0757.8
NC_014638:56500:8545185451864821032Bifidobacterium bifidum PRL2010 chromosome, complete genomeglycosyltransferase involved in cell wall biogenesis2e-0757.8
NC_018679:4028412:4031210403121040332041995Alteromonas macleodii str. 'Balearic Sea AD45' chromosome, completefamily 2 glycosyl transferase2e-0757.8
NC_015174:5157355:5165448516544851664851038Planctomyces brasiliensis DSM 5305 chromosome, complete genomeglycosyl transferase family 22e-0757.4
NC_017218:2119964:2132923213292321339691047Bifidobacterium breve ACS-071-V-Sch8b chromosome, complete genomeglycosyltransferase, group 2 family protein3e-0757
NC_012914:569471:6098796098796121942316Paenibacillus sp. JDR-2, complete genomeGlycosyltransferase-like protein probably involved in cell wall biogenesis3e-0757
NC_009052:3381943:339289933928993393714816Shewanella baltica OS155, complete genomeglycosyl transferase, family 23e-0757
NC_009615:2590207:259965725996572600646990Parabacteroides distasonis ATCC 8503 chromosome, complete genomeglycosyl transferase family protein4e-0756.6
NC_012925:1125876:113180611318061132786981Streptococcus suis P1/7, complete genomeglycosyl transferase4e-0756.6
NC_009442:1216355:122049812204981221478981Streptococcus suis 05ZYH33 chromosome, complete genomecell wall biosynthesis glycosyltransferase4e-0756.6
NC_012926:727716:746355746355747335981Streptococcus suis BM407 chromosome, complete genomeglycosyl transferase family protein4e-0756.6
NC_012438:132456:151643151643152536894Sulfurihydrogenibium azorense Az-Fu1 chromosome, complete genomeglycosyl transferase, group 2 family4e-0756.6
NC_019897:4131337:413439041343904135349960Thermobacillus composti KWC4 chromosome, complete genomeglycosyltransferase3e-0756.6
NC_020304:752012:7544067544067555781173Desulfocapsa sulfexigens DSM 10523, complete genomeglycosyl transferase3e-0756.6
NC_009523:5104413:5125245512524551283433099Roseiflexus sp. RS-1 chromosome, complete genomeglycosyl transferase family protein3e-0756.6
NC_014363:645397:6605956605956616621068Olsenella uli DSM 7084 chromosome, complete genomeglycosyl transferase family 25e-0756.2
NC_000911:352263:3691493691493702191071Synechocystis sp. PCC 6803, complete genomehypothetical protein5e-0756.2
NC_017039:352263:3691493691493702191071Synechocystis sp. PCC 6803 substr. PCC-P, complete genomehypothetical protein5e-0756.2
NC_017052:352251:3691373691373702071071Synechocystis sp. PCC 6803 substr. PCC-N, complete genomehypothetical protein5e-0756.2
NC_017277:352263:3691493691493702191071Synechocystis sp. PCC 6803, complete genomehypothetical protein5e-0756.2
NS_000195:1785910:1809073180907318102211149Candidatus Cloacamonas acidaminovoransglycosyl transferase, group 2 family protein5e-0756.2
NC_014002:80967:957159571596542828Methanohalophilus mahii DSM 5219 chromosome, complete genomeglycosyl transferase family 25e-0756.2
NC_012466:318675:3198443198443208631020Streptococcus pneumoniae JJA, complete genomess-1,3-N-acetylglucosaminyltransferase5e-0756.2
NC_012918:1921891:1936602193660219378071206Geobacter sp. M21 chromosome, complete genomefamily 2 glycosyl transferase5e-0756.2
NC_020291:4944835:496749549674954968325831Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeputative glycosyltransferase4e-0756.2
NC_018876:2305659:2332099233209923331511053Methanolobus psychrophilus R15 chromosome, complete genomeglycosyltransferase4e-0756.2
NC_003366:613798:6263876263876274331047Clostridium perfringens str. 13, complete genomespore coat polysaccharide biosynthesis protein6e-0755.8
NC_004663:44647:455944559446565972Bacteroides thetaiotaomicron VPI-5482, complete genomeputative glycosyltransferase6e-0755.8
NC_011757:5102732:5102732510273251051462415Methylobacterium chloromethanicum CM4, complete genomecellulose synthase catalytic subunit (UDP-forming)8e-0755.5
NC_011757:1627698:1625197162519716277012505Methylobacterium chloromethanicum CM4, complete genomecellulose synthase catalytic subunit (UDP-forming)8e-0755.5
NC_010172:1522707:1520215152021515227102496Methylobacterium extorquens PA1, complete genomecellulose synthase catalytic subunit (UDP-forming)8e-0755.5
NC_012808:1220378:1217877121787712203812505Methylobacterium extorquens AM1, complete genomeCellulose synthase (UDP-forming)7e-0755.5
NC_011894:3820000:3847111384711138495432433Methylobacterium nodulans ORS 2060, complete genomecellulose synthase catalytic subunit (UDP-forming)7e-0755.5
NC_012466:318675:320878320878321834957Streptococcus pneumoniae JJA, complete genomess-1,4-galactosyltransferase1e-0655.1
NC_011979:1590432:160725216072521608160909Geobacter sp. FRC-32, complete genomeglycosyl transferase family 21e-0655.1
NC_003552:2674385:2676934267693426779861053Methanosarcina acetivorans C2A, complete genomeglycosyltransferase1e-0655.1
NC_015690:632565:6432656432656452772013Paenibacillus mucilaginosus KNP414 chromosome, complete genomefamily 2 glycosyl transferase1e-0655.1
NC_011369:3022235:302508230250823026011930Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, completefamily 2 glycosyl transferase1e-0655.1
NC_013665:1922000:1936697193669719377311035Methanocella paludicola SANAE, complete genomeputative glycosyltransferase9e-0755.1
NC_011884:1821862:183484618348461835769924Cyanothece sp. PCC 7425, complete genomeglycosyl transferase family 22e-0654.7
NC_014387:2661496:266693126669312667140210Butyrivibrio proteoclasticus B316 chromosome 1, complete genomeglycosyl transferase GT2 family protein1e-0654.7
NC_015052:2181514:2188802218880221898511050Bifidobacterium longum subsp. infantis 157F, complete genomeglycosyltransferase1e-0654.7
NC_014363:645397:6594446594446605951152Olsenella uli DSM 7084 chromosome, complete genomeglycosyl transferase family 21e-0654.7
NC_011296:463359:471019471019471972954Thermodesulfovibrio yellowstonii DSM 11347, complete genomeglycosyltransferase involved in cell wall biogenesis1e-0654.7
NC_020244:3490460:3499331349933135004521122Bacillus subtilis XF-1, complete genomeglycosyltransferase1e-0654.7
NC_012917:1506083:152325415232541524105852Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeglycosyl transferase family 21e-0654.7
NC_015497:3739556:374594737459473746852906Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genomeglycosyl transferase family 21e-0654.7
NC_014370:1117283:113550511355051136452948Prevotella melaninogenica ATCC 25845 chromosome chromosome I,glycosyltransferase, group 2 family protein1e-0654.7
NC_018679:4028412:4028412402841240312072796Alteromonas macleodii str. 'Balearic Sea AD45' chromosome, completefamily 2 glycosyl transferase1e-0654.7
NC_009614:3748950:374798837479883748953966Bacteroides vulgatus ATCC 8482 chromosome, complete genomeglycosyl transferase family protein2e-0654.3
NC_013757:1544348:1571270157127015735732304Geodermatophilus obscurus DSM 43160, complete genomeresponse regulator receiver modulated diguanylate cyclase2e-0654.3
NC_015510:3641676:365450236545023655461960Haliscomenobacter hydrossis DSM 1100 chromosome, complete genomefamily 2 glycosyl transferase2e-0654.3
NC_013173:133466:1437661437661472363471Desulfomicrobium baculatum DSM 4028, complete genomeglycosyl transferase family 22e-0654.3
NC_015500:2197000:220421222042122205198987Treponema brennaborense DSM 12168 chromosome, complete genomeglycosyl transferase family 23e-0653.9
NC_015859:370500:3844353844353854781044Corynebacterium variabile DSM 44702 chromosome, complete genomeputative glycosyltransferase3e-0653.9
NC_016070:1340500:1355976135597613571001125Thermoproteus tenax Kra 1, complete genomeglycosyltransferase3e-0653.9
NC_015067:2136048:2144608214460821456391032Bifidobacterium longum subsp. longum JCM 1217, complete genomeglycosyltransferase2e-0653.9
NC_019974:3816000:383095338309533831927975Natronococcus occultus SP4, complete genomeglycosyl transferase2e-0653.9
NC_014656:1829336:1855174185517418562051032Bifidobacterium longum subsp. longum BBMN68 chromosome, completewcaa52e-0653.9
NC_014216:2127370:2138211213821121406072397Desulfurivibrio alkaliphilus AHT2 chromosome, complete genomeglycosyl transferase family 22e-0653.9
NC_015663:4950000:4986313498631349873231011Enterobacter aerogenes KCTC 2190 chromosome, complete genomeCapsular polysaccharide biosynthesis protein2e-0653.9
NC_013740:842841:862980862980863954975Acidaminococcus fermentans DSM 20731, complete genomeglycosyl transferase family 22e-0653.9
NC_009483:2640403:271426227142622715149888Geobacter uraniireducens Rf4 chromosome, complete genomeglycosyl transferase family protein3e-0653.5
NC_010337:748467:7520637520637531691107Heliobacterium modesticaldum Ice1, complete genomeglycosyl transferase, group 2 family protein, putative3e-0653.5
NC_008599:903530:9035309035309045311002Campylobacter fetus subsp. fetus 82-40, complete genomesugar transferase3e-0653.5
NC_016776:2473318:248898124889812489931951Bacteroides fragilis 638R, complete genomeputative capsular polysaccharide glycosyltransferase6e-0652.8
NC_015315:1717151:1729212172921217304651254Thermoproteus uzoniensis 768-20 chromosome, complete genomefamily 2 glycosyl transferase5e-0652.8
NC_011894:4360577:4387765438776543903082544Methylobacterium nodulans ORS 2060, complete genomeglycosyl transferase family 25e-0652.8
NC_013665:1922000:1932534193253419335981065Methanocella paludicola SANAE, complete genomeputative glycosyltransferase5e-0652.8
NC_007940:782207:7832077832077852792073Rickettsia bellii RML369-C, complete genomeGlycosyltransferase5e-0652.8
NC_009883:871594:8715948715948736662073Rickettsia bellii OSU 85-389, complete genomeGlycosyltransferase5e-0652.8
NC_016584:5305417:5309539530953953105641026Desulfosporosinus orientis DSM 765 chromosome, complete genomeglycosyl transferase family protein8e-0652.4
NC_014334:1039248:1042156104215610432171062Lactobacillus casei str. Zhang chromosome, complete genomeglycosyltransferase-like enzyme7e-0652.4
NC_014377:480158:495071495071495865795Thermosediminibacter oceani DSM 16646 chromosome, complete genomeglycosyl transferase family 27e-0652.4
NC_011884:1821862:1832859183285918338841026Cyanothece sp. PCC 7425, complete genomeglycosyl transferase family 26e-0652.4
NC_013714:2086526:209421620942162095178963Bifidobacterium dentium Bd1, complete genomeGlycosyltransferase, family 26e-0652.4
NC_017249:7993713:8091092809109280925491458Bradyrhizobium japonicum USDA 6, complete genomeN-acetylglucosaminyltransferase, nodulation protein9e-0652
NC_004463:2158116:2185433218543321868901458Bradyrhizobium japonicum USDA 110, complete genomechitin synthase9e-0652