Pre_GI: BLASTP Hits

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Query: NC_008253:1938975:1952452 Escherichia coli 536, complete genome

Start: 1952452, End: 1953009, Length: 558

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (536; O6:K15:H31) is a uropathogenic Escherichia coli (UPEC) that was isolated from a patient with acute pyelonephritis (inflammation of the kidney and pelvis). This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004431:2185750:219929721992972199854558Escherichia coli CFT073, complete genomePutative type IV pilin protein precursor2e-59228
NC_011601:2139188:216295121629512163508558Escherichia coli O127:H6 str. E2348/69 chromosome, complete genometype IV pilin-like protein4e-59227
NC_011294:2053991:206858120685812069138558Salmonella enterica subsp. enterica serovar Enteritidis strtype IV pilin5e-55213
NC_011149:1987291:200280920028092003366558Salmonella enterica subsp. enterica serovar Agona str. SL483,putative type IV pilin protein7e-55213
NC_011205:2180598:219559821955982196155558Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853type IV pilin protein2e-54211
NC_016831:947281:974275974275974736462Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative type IV pilin3e-40164
NC_011274:2044000:205980420598042060265462Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91type IV pilin2e-39161
NC_004547:1873390:191572419157241916281558Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeputative type IV pilin protein precursor7e-27120