Pre_GI: BLASTP Hits

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Query: NC_008228:816000:826174 Pseudoalteromonas atlantica T6c, complete genome

Start: 826174, End: 826650, Length: 477

Host Lineage: Pseudoalteromonas atlantica; Pseudoalteromonas; Pseudoalteromonadaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Isolated from a biofilm from San Diego Bay in California. Marine biofilm bacterium associated with shell disease in shellfish. A common marine bacterium that exists both in the water column, and in biofilms attached to surfaces. This organism produces a well characterized, commercially important agarase. Pseudoalteromonas atlantica has been isolated from lesions on crabs with shell disease. Shell disease is characterized by progressive degradation of the shell, often leading to an infection of the hemolymph (blood) and may be caused by Pseudoalteromonas, Alteromonas, Vibrio, or other marine organisms. In addition to producing extracellular enzymes which attack the shell, Pseudoalteromonas atlantica produces a the lipopolysaccharide which has been shown to be a potential virulence factor in shell disease.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015554:3808529:381057238105723811033462Alteromonas sp. SN2 chromosome, complete genomehypothetical protein5e-50196
NC_004347:4007847:403362840336284034095468Shewanella oneidensis MR-1, complete genomehypothetical protein3e-38157
NC_009052:4168776:418559341855934186099507Shewanella baltica OS155, complete genomehypothetical protein6e-38156
NC_008321:3815940:384862038486203849108489Shewanella sp. MR-4, complete genomehypothetical protein1e-37155
NC_007626:4135961:415763241576324158093462Magnetospirillum magneticum AMB-1, complete genomehypothetical protein7e-1579.7
NC_007626:4688777:469462746946274695088462Magnetospirillum magneticum AMB-1, complete genomehypothetical protein3e-1477.4
NC_011662:1160887:117184411718441172278435Thauera sp. MZ1T, complete genomehypothetical protein7e-1269.7
NC_007626:2283793:229241222924122292855444Magnetospirillum magneticum AMB-1, complete genomehypothetical protein2e-1168.2
NC_010172:57500:810628106281523462Methylobacterium extorquens PA1, complete genomehypothetical protein1e-1065.9
NC_010084:534937:547145547145547591447Burkholderia multivorans ATCC 17616 chromosome 1, completehypothetical protein1e-1065.5
NC_010804:2960352:297718229771822977628447Burkholderia multivorans ATCC 17616 chromosome 1, completehypothetical protein1e-1065.5
NC_014006:611592:618840618840619307468Sphingobium japonicum UT26S chromosome 1, complete genomehypothetical protein3e-1064.3
NC_007626:2283793:229743122974312297874444Magnetospirillum magneticum AMB-1, complete genomehypothetical protein8e-1062.8
NC_011757:39881:709927099271453462Methylobacterium chloromethanicum CM4, complete genomehypothetical protein2e-0961.6
NC_010084:3051355:306599530659953066441447Burkholderia multivorans ATCC 17616 chromosome 1, completehypothetical protein3e-0960.8
NC_010804:450130:458332458332458778447Burkholderia multivorans ATCC 17616 chromosome 1, completehypothetical protein3e-0960.8
NC_013858:416000:421641421641422090450Azospirillum sp. B510 plasmid pAB510d, complete sequencehypothetical protein3e-0857.4