Pre_GI: BLASTP Hits

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Query: NC_008228:4696338:4715548 Pseudoalteromonas atlantica T6c, complete genome

Start: 4715548, End: 4716150, Length: 603

Host Lineage: Pseudoalteromonas atlantica; Pseudoalteromonas; Pseudoalteromonadaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Isolated from a biofilm from San Diego Bay in California. Marine biofilm bacterium associated with shell disease in shellfish. A common marine bacterium that exists both in the water column, and in biofilms attached to surfaces. This organism produces a well characterized, commercially important agarase. Pseudoalteromonas atlantica has been isolated from lesions on crabs with shell disease. Shell disease is characterized by progressive degradation of the shell, often leading to an infection of the hemolymph (blood) and may be caused by Pseudoalteromonas, Alteromonas, Vibrio, or other marine organisms. In addition to producing extracellular enzymes which attack the shell, Pseudoalteromonas atlantica produces a the lipopolysaccharide which has been shown to be a potential virulence factor in shell disease.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_018012:3102215:311779431177943118393600Thiocystis violascens DSM 198 chromosome, complete genomehypothetical protein1e-37155
NC_018697:361339:363744363744364334591Cycloclasticus sp. P1 chromosome, complete genomeGlutamate synthase domain 22e-37155
NC_017506:1222000:122641812264181226996579Marinobacter adhaerens HP15 chromosome, complete genomecytochrome c family protein5e-34144
NC_017986:331610:363885363885364325441Pseudomonas putida ND6 chromosome, complete genomeglutamate synthase domain-containing 22e-28125
NC_013194:1040197:104115410411541041744591Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completecytochrome c family protein5e-21100
NC_005823:3487108:348957734895773490188612Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130hypothetical protein2e-1789
NC_014541:1231021:125221612522161252719504Ferrimonas balearica DSM 9799 chromosome, complete genomehypothetical protein3e-1271.6
NC_014935:918855:938311938311938892582Nitratifractor saLSUginis DSM 16511 chromosome, complete genomecytochrome c family protein1e-1066.6
NC_011026:3009500:301566530156653016300636Chloroherpeton thalassium ATCC 35110, complete genomeconserved hypothetical protein; putative signal peptide7e-1063.5
NC_015738:1114919:1128925112892511305921668Eggerthella sp. YY7918, complete genomehypothetical protein8e-0960.5
NC_012796:1049034:1112342111234211146482307Desulfovibrio magneticus RS-1, complete genometwo-component hybrid sensor and regulator2e-0755.5
NC_015681:401084:409664409664410275612Thermodesulfatator indicus DSM 15286 chromosome, complete genomehypothetical protein4e-0651.2