Pre_GI: BLASTP Hits

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Query: NC_008228:4696338:4714192 Pseudoalteromonas atlantica T6c, complete genome

Start: 4714192, End: 4714515, Length: 324

Host Lineage: Pseudoalteromonas atlantica; Pseudoalteromonas; Pseudoalteromonadaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Isolated from a biofilm from San Diego Bay in California. Marine biofilm bacterium associated with shell disease in shellfish. A common marine bacterium that exists both in the water column, and in biofilms attached to surfaces. This organism produces a well characterized, commercially important agarase. Pseudoalteromonas atlantica has been isolated from lesions on crabs with shell disease. Shell disease is characterized by progressive degradation of the shell, often leading to an infection of the hemolymph (blood) and may be caused by Pseudoalteromonas, Alteromonas, Vibrio, or other marine organisms. In addition to producing extracellular enzymes which attack the shell, Pseudoalteromonas atlantica produces a the lipopolysaccharide which has been shown to be a potential virulence factor in shell disease.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007484:580106:595935595935596564630Nitrosococcus oceani ATCC 19707, complete genomeCytochrome c, class I6e-1269.7
NC_015572:2262374:227822822782282278797570Methylomonas methanica MC09 chromosome, complete genomecytochrome c class I1e-1168.6
NC_012968:325529:326405326405327016612Methylotenera mobilis JLW8, complete genomecytochrome c class I6e-1166.2
NC_010682:288415:308139308139308462324Ralstonia pickettii 12J chromosome 1, complete sequencecytochrome c class I6e-1166.2
NC_016745:546249:562506562506563123618Oceanimonas sp. GK1 chromosome, complete genomecytochrome c42e-1064.7
NC_015424:4251369:427300242730024273619618Aeromonas veronii B565 chromosome, complete genomecytochrome c42e-0961.2
NC_008260:2992813:299627829962782996931654Alcanivorax borkumensis SK2, complete genomecytochrome c4 precursor2e-0960.8
NC_014315:3278386:329046532904653290806342Nitrosococcus watsoni C-113 chromosome, complete genomecytochrome c class I8e-0959.3
NC_008340:1241300:124969012496901250007318Alkalilimnicola ehrlichei MLHE-1, complete genomecytochrome c, class I2e-0857.8
NC_010087:376918:386911386911387591681Burkholderia multivorans ATCC 17616 chromosome 3, completecytochrome c class I5e-0856.6
NC_009656:3127240:312724031272403127551312Pseudomonas aeruginosa PA7 chromosome, complete genomeclass I cytochrome c6e-0856.2
NC_010087:460591:467378467378468178801Burkholderia multivorans ATCC 17616 chromosome 3, completecytochrome c class I5e-0856.2
NC_010801:421906:456680456680457480801Burkholderia multivorans ATCC 17616 chromosome 3, completecytochrome c5535e-0856.2
NC_009254:700891:721478721478722278801Burkholderia vietnamiensis G4 chromosome 3, complete sequencecytochrome c, class I5e-0856.2
NC_004347:718091:731442731442731744303Shewanella oneidensis MR-1, complete genomemonoheme cytochrome c1e-0755.1
NC_007484:3429140:344427434442743444615342Nitrosococcus oceani ATCC 19707, complete genomeCytochrome c, class I4e-0753.5
NC_011206:2685499:269244026924402693222783Acidithiobacillus ferrooxidans ATCC 53993, complete genomecytochrome c class I4e-0753.5
NC_011761:2785660:279267927926792793383705Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completecytochrome c44e-0753.5
NC_016745:123772:128244128244128858615Oceanimonas sp. GK1 chromosome, complete genomeclass I cytochrome c5e-0753.1
NC_015723:430165:443643443643444317675Cupriavidus necator N-1 chromosome 2, complete sequencecytochrome c46e-0753.1