Pre_GI: BLASTP Hits

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Query: NC_008228:3841897:3852928 Pseudoalteromonas atlantica T6c, complete genome

Start: 3852928, End: 3854097, Length: 1170

Host Lineage: Pseudoalteromonas atlantica; Pseudoalteromonas; Pseudoalteromonadaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Isolated from a biofilm from San Diego Bay in California. Marine biofilm bacterium associated with shell disease in shellfish. A common marine bacterium that exists both in the water column, and in biofilms attached to surfaces. This organism produces a well characterized, commercially important agarase. Pseudoalteromonas atlantica has been isolated from lesions on crabs with shell disease. Shell disease is characterized by progressive degradation of the shell, often leading to an infection of the hemolymph (blood) and may be caused by Pseudoalteromonas, Alteromonas, Vibrio, or other marine organisms. In addition to producing extracellular enzymes which attack the shell, Pseudoalteromonas atlantica produces a the lipopolysaccharide which has been shown to be a potential virulence factor in shell disease.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017986:1155811:1172590117259011737111122Pseudomonas putida ND6 chromosome, complete genomehypothetical protein3e-47189
NC_010084:2822295:2834865283486528359861122Burkholderia multivorans ATCC 17616 chromosome 1, completehypothetical protein9e-47187
NC_010804:671081:6887876887876899081122Burkholderia multivorans ATCC 17616 chromosome 1, completehypothetical protein9e-47187
NC_002977:652481:6597386597386610091272Methylococcus capsulatus str. Bath, complete genomehypothetical protein4e-25115
NC_010995:4117963:4124026412402641251861161Cellvibrio japonicus Ueda107, complete genomehypothetical protein2e-22107
NC_013855:892657:9113279113279125141188Azospirillum sp. B510 plasmid pAB510a, complete sequencehypothetical protein6e-21102
NC_016047:4108910:4110605411060541119571353Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completehypothetical protein2e-20100
NC_015434:3507059:3509044350904435104981455Verrucosispora maris AB-18-032 chromosome, complete genomehypothetical protein2e-20100
NC_014479:3939183:3939183393918339405351353Bacillus subtilis subsp. spizizenii str. W23 chromosome, completehypothetical protein5e-2099
NC_020244:3961337:3961337396133739626891353Bacillus subtilis XF-1, complete genomehypothetical protein5e-2099
NC_011660:2509362:2513950251395025153651416Listeria monocytogenes HCC23 chromosome, complete genomepyruvyl-transferases domain protein6e-2099
NC_008639:2702662:2712633271263327137361104Chlorobium phaeobacteroides DSM 266, complete genomehypothetical protein1e-1481.3
NC_017243:1652000:166443816644381665181744Brachyspira intermedia PWS/A chromosome, complete genomeradical SAM protein2e-0653.9