Pre_GI: BLASTP Hits

Some Help

Query: NC_008228:3841897:3848726 Pseudoalteromonas atlantica T6c, complete genome

Start: 3848726, End: 3849502, Length: 777

Host Lineage: Pseudoalteromonas atlantica; Pseudoalteromonas; Pseudoalteromonadaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Isolated from a biofilm from San Diego Bay in California. Marine biofilm bacterium associated with shell disease in shellfish. A common marine bacterium that exists both in the water column, and in biofilms attached to surfaces. This organism produces a well characterized, commercially important agarase. Pseudoalteromonas atlantica has been isolated from lesions on crabs with shell disease. Shell disease is characterized by progressive degradation of the shell, often leading to an infection of the hemolymph (blood) and may be caused by Pseudoalteromonas, Alteromonas, Vibrio, or other marine organisms. In addition to producing extracellular enzymes which attack the shell, Pseudoalteromonas atlantica produces a the lipopolysaccharide which has been shown to be a potential virulence factor in shell disease.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_018868:569423:578613578613579539927Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomeglycosyltransferase6e-50197
NC_016602:103878:131550131550132380831Vibrio furnissii NCTC 11218 chromosome 1, complete sequenceglycosyltransferase9e-35147
NC_015497:1287877:132360213236021324441840Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genomeglycosyl transferase family 22e-34145
NC_010498:1035406:104345710434571044278822Escherichia coli SMS-3-5, complete genomeglycosyl transferase, group 25e-32137
NC_011740:2135141:214061021406102141467858Escherichia fergusonii ATCC 35469, complete genomeGlycosyltransferase7e-30130
NC_012913:626449:630921630921631724804Aggregatibacter aphrophilus NJ8700, complete genomeamylovoran biosynthesis glycosyltransferase AmsE2e-26119
NC_015666:1623790:163420216342021635026825Halopiger xanaduensis SH-6 chromosome, complete genomefamily 2 glycosyl transferase5e-26118
NC_014033:1564733:158906915890691589884816Prevotella ruminicola 23 chromosome, complete genomegroup 2 family glycosyltransferase1e-24113
NC_014935:1955226:196324119632411964050810Nitratifractor saLSUginis DSM 16511 chromosome, complete genomeglycosyl transferase family 21e-24113
NC_016513:1958500:197945819794581980267810Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completeamylovoran biosynthesis glycosylltransferase AmsE6e-24110
NC_017068:2827568:284006728400672840924858Selenomonas ruminantium subsp. lactilytica TAM6421, completeputative glycosyl transferase family 2 protein1e-23110
NC_010610:107500:112815112815113669855Lactobacillus fermentum IFO 3956, complete genomeputative glycosyltransferase1e-23110
NC_013416:1621469:164150916415091642318810Aggregatibacter actinomycetemcomitans D11S-1, complete genomeamylovoran biosynthesis glycosyltransferase AmsE2e-23109
NC_015420:35384:466504665047483834Lactobacillus buchneri NRRL B-30929 plasmid pLBUC01, completeglycosyl transferase family 26e-22104
NC_010831:2078329:208719520871952088016822Chlorobium phaeobacteroides BS1, complete genomeglycosyl transferase family 27e-21100
NC_013204:2826500:283371928337192834558840Eggerthella lenta DSM 2243, complete genomeglycosyl transferase family 21e-20100
NC_014758:1207894:120969912096991210538840Calditerrivibrio nitroreducens DSM 19672 chromosome, completeglycosyl transferase family 29e-2097.4
NC_002663:564958:586170586170586970801Pasteurella multocida subsp. multocida str. Pm70, complete genomehypothetical protein1e-1997.1
NC_013202:1367447:138084213808421381690849Halomicrobium mukohataei DSM 12286, complete genomeglycosyl transferase family 24e-1995.1
NC_013961:2260250:228667622866762287476801Erwinia amylovora, complete genomeputative glycosyltransferase6e-1994.7
NC_013971:2297777:232420323242032325003801Erwinia amylovora ATCC 49946 chromosome, complete genomeamylovoran biosynthesis glycosyltransferase6e-1994.7
NC_007519:2847816:2865413286541328665461134Desulfovibrio alaskensis G20 chromosome, complete genomecell wall biosynthesis glycosyltransferase-like protein6e-1994.7
NC_021175:1973880:198651519865151987333819Streptococcus oligofermentans AS 1.3089, complete genomeextracellular polysaccharide glycosyltransferase9e-1994
NC_019974:3465496:348844134884413489283843Natronococcus occultus SP4, complete genomeglycosyl transferase1e-1893.6
CU928145:2324495:233241523324152333233819Escherichia coli 55989 chromosome, complete genomeglycosyl transferase, putative3e-1892
NC_011748:2324495:233241523324152333233819Escherichia coli 55989, complete genomeglycosyl transferase, putative3e-1892
NC_013941:2544569:255814925581492558946798Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeglycosyltransferase WbgO6e-1891.3
NC_014837:387868:396759396759397574816Pantoea sp. At-9b chromosome, complete genomefamily 2 glycosyl transferase8e-1890.9
NC_015578:247266:259942259942260937996Treponema primitia ZAS-2 chromosome, complete genomeglycosyltransferase1e-1790.1
NC_012214:1588573:159965415996541600454801Erwinia pyrifoliae Ep1/96, complete genomeglycosyltransferase WceM (synonym for CpsE; similar to AmsE), involved in exopolysaccharid synthesis2e-1789.4
NC_018697:2055725:206895620689562069750795Cycloclasticus sp. P1 chromosome, complete genomeGlycosyl transferase family 22e-1789.4
NC_015385:1406419:1423172142317214242091038Treponema succinifaciens DSM 2489 chromosome, complete genomeglycosyl transferase family 24e-1788.6
NC_004663:2014035:203468820346882035497810Bacteroides thetaiotaomicron VPI-5482, complete genomeputative glycosyltransferase6e-1788.2
NC_015578:61820:7401674016750291014Treponema primitia ZAS-2 chromosome, complete genomeglycosyltransferase, family 27e-1787.8
NC_014387:497883:5308925308925319231032Butyrivibrio proteoclasticus B316 chromosome 1, complete genomeglycosyl transferase GT2 family protein1e-1687
NC_020207:843822:850361850361851182822Enterococcus faecium NRRL B-2354, complete genomeglycosyl transferase, family 21e-1686.7
NC_018876:2403892:241828424182842419234951Methanolobus psychrophilus R15 chromosome, complete genomeglycosyl transferase family protein2e-1686.3
NC_015948:2032399:204363720436372044170534Haloarcula hispanica ATCC 33960 chromosome chromosome I, completeputative glycosyltransferase2e-1686.3
NC_014624:1675500:168986916898691690684816Eubacterium limosum KIST612 chromosome, complete genomeglycosyl transferase family protein6e-1684.7
NC_012968:1108687:1123533112353311254131881Methylotenera mobilis JLW8, complete genomeglycosyl transferase family 21e-1584
NC_018697:2055725:2076275207627520773211047Cycloclasticus sp. P1 chromosome, complete genomeGlycosyltransferase family 22e-1582.8
NC_008789:835909:869031869031869855825Halorhodospira halophila SL1, complete genomeglycosyl transferase, family 23e-1582.4
NC_002977:652481:6566596566596577621104Methylococcus capsulatus str. Bath, complete genomeglycosyl transferase, group 2 family protein3e-1582
NC_010682:661272:668283668283669125843Ralstonia pickettii 12J chromosome 1, complete sequenceglycosyl transferase family 25e-1581.6
NC_009337:715500:750976750976751827852Chlorobium phaeovibrioides DSM 265 chromosome, complete genomeglycosyl transferase family protein6e-1581.3
NC_009615:2184300:219158221915822192409828Parabacteroides distasonis ATCC 8503 chromosome, complete genomeglycosyl transferase family protein1e-1480.5
NC_013715:1445959:1458539145853914605361998Rothia mucilaginosa DY-18, complete genomeglycosyltransferase involved in cell wall biogenesis2e-1479.3
NC_014935:1955226:1967172196717219691181947Nitratifractor saLSUginis DSM 16511 chromosome, complete genomeglycosyl transferase family 23e-1479
NC_009615:1627961:163867816386781639655978Parabacteroides distasonis ATCC 8503 chromosome, complete genomeglycosyl transferase family protein4e-1478.6
NC_013946:2050871:206067320606732061473801Meiothermus ruber DSM 1279 chromosome, complete genomefamily 2 glycosyl transferase1e-1377.4
NC_013173:2884887:2907167290716729081771011Desulfomicrobium baculatum DSM 4028, complete genomeglycosyl transferase family 29e-1477.4
NC_015500:533528:5395815395815406121032Treponema brennaborense DSM 12168 chromosome, complete genomeglycosyl transferase family 21e-1376.6
NC_008800:3330944:334799433479943348860867Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,putative glycosyltransferase2e-1376.3
NC_011832:2306341:2335323233532323363781056Candidatus Methanosphaerula palustris E1-9c, complete genomeglycosyl transferase family 27e-1374.3
NC_003901:1346281:135091813509181351853936Methanosarcina mazei Go1, complete genomeglycosyltransferase1e-1273.9
NC_008609:3672653:3680168368016836839203753Pelobacter propionicus DSM 2379, complete genomeglycosyl transferase, family 21e-1273.9
NC_013714:2294342:231611723161172317055939Bifidobacterium dentium Bd1, complete genomeGlycosyltransferase1e-1273.6
NC_009615:2184300:219714121971412198070930Parabacteroides distasonis ATCC 8503 chromosome, complete genomeglycosyl transferase family protein2e-1273.2
NC_015388:269301:293250293250294119870Desulfobacca acetoxidans DSM 11109 chromosome, complete genomeglycosyl transferase family 22e-1273.2
NC_014212:2776457:278530727853072786107801Meiothermus silvanus DSM 9946 chromosome, complete genomeglycosyl transferase family 22e-1272.8
NC_020272:599064:623045623045623887843Bacillus amyloliquefaciens IT-45, complete genomeglycosyltransferase4e-1272
NC_011601:2211917:222083322208332221570738Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeglycosyl transferase family protein6e-1271.6
NC_006347:2154906:2166664216666421676861023Bacteroides fragilis YCH46, complete genomeputative glycosyltransferase4e-1271.6
NC_015554:817500:8331618331618341891029Alteromonas sp. SN2 chromosome, complete genomeglycosyl transferase family protein9e-1270.9
NC_016603:3181592:319735131973513198181831Acinetobacter calcoaceticus PHEA-2 chromosome, complete genomeputative UDP-galactose--lipooligosaccharide galactosyltransferase1e-1170.1
NC_009337:1200722:121131812113181212121804Chlorobium phaeovibrioides DSM 265 chromosome, complete genomeglycosyl transferase family protein2e-1169.3
NC_011769:3401353:3411353341135334124441092Desulfovibrio vulgaris str. 'Miyazaki F', complete genomeglycosyl transferase family 23e-1169.3
NC_013959:2892660:2903948290394829050271080Sideroxydans lithotrophicus ES-1 chromosome, complete genomeglycosyl transferase family 24e-1168.9
NC_014212:2776457:278726427872642788067804Meiothermus silvanus DSM 9946 chromosome, complete genomeglycosyl transferase family 23e-1168.9
NC_013173:3679326:3714755371475537157801026Desulfomicrobium baculatum DSM 4028, complete genomeglycosyl transferase family 23e-1168.9
NC_014973:1136794:116225611622561163206951Geobacter sp. M18 chromosome, complete genomefamily 2 glycosyl transferase6e-1168.2
NC_015580:1302000:1307327130732713083281002Novosphingobium sp. PP1Y, complete genomeglycosyl transferase family 27e-1167.8
NC_009483:1936486:1951821195182119529181098Geobacter uraniireducens Rf4 chromosome, complete genomeglycosyl transferase family protein8e-1167.8
NC_011979:1590432:160725216072521608160909Geobacter sp. FRC-32, complete genomeglycosyl transferase family 28e-1167.4
NC_002977:652481:6578176578176588421026Methylococcus capsulatus str. Bath, complete genomeglycosyl transferase, group 2 family protein9e-1167.4
NC_007759:2638992:263899226389922639900909Syntrophus aciditrophicus SB, complete genomeglycosyltransferase2e-1066.6
NC_008609:3732192:374463137446313745557927Pelobacter propionicus DSM 2379, complete genomeglycosyl transferase, family 25e-1064.7
NC_012814:1757753:1773480177348017745651086Bifidobacterium animalis subsp. lactis Bl-04, complete genomeglycosyl transferase family protein9e-1064.3
NC_012815:1757992:1773252177325217743371086Bifidobacterium animalis subsp. lactis DSM 10140, complete genomeglycosyl transferase family protein9e-1064.3
NC_011894:7109374:7110027711002771122102184Methylobacterium nodulans ORS 2060, complete genomeglycosyl transferase family 21e-0963.9
NC_006958:359760:385372385372386196825Corynebacterium glutamicum ATCC 13032, complete genomePUTATIVE GLYCOSYLTRANSFERASE1e-0963.5
NC_003450:359759:385371385371386195825Corynebacterium glutamicum ATCC 13032, complete genomecell wall biogenesis glycosyltransferase1e-0963.5
NC_011000:3409126:3419149341914934204531305Burkholderia cenocepacia J2315 chromosome 1, complete sequenceglycosyltransferase6e-0961.6
NC_016803:1027017:1053563105356310546211059Desulfovibrio desulfuricans ND132 chromosome, complete genomefamily 2 glycosyl transferase1e-0860.5
NC_008345:3394154:341319434131943414057864Shewanella frigidimarina NCIMB 400, complete genomeglycosyl transferase, family 21e-0860.5
NC_016616:49388:533725337254301930Dechlorosoma suillum PS chromosome, complete genomeglycosyl transferase family protein1e-0860.5
NC_009523:5104413:5105307510530751063111005Roseiflexus sp. RS-1 chromosome, complete genomeglycosyl transferase family protein2e-0859.7
NC_011750:1034919:105224810522481053075828Escherichia coli IAI39 chromosome, complete genomeUDP-Gal:GlcNAc alpha-pyrophosphate-R beta 1, 3-galactosyltransferase3e-0859.3
NC_015554:2355379:236298523629852363923939Alteromonas sp. SN2 chromosome, complete genomeglycosyl transferase family protein2e-0859.3
NC_014624:3561756:3579585357958535808441260Eubacterium limosum KIST612 chromosome, complete genomehypothetical protein3e-0858.9
NC_017221:1763914:180053918005391801486948Bifidobacterium longum subsp. longum KACC 91563 chromosome,hypothetical protein5e-0858.5
NC_015059:76000:8047480474816311158Acidobacterium sp. MP5ACTX9 plasmid pACIX904, complete sequenceglycosyl transferase family 27e-0857.8
NC_011883:487187:4888104888104898381029Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,glycosyl transferase family 28e-0857.8
NC_012967:2025127:203508920350892035856768Escherichia coli B str. REL606 chromosome, complete genomeputative glycosyltransferase WbbD1e-0757.4
NC_007759:2638992:2643298264329826443891092Syntrophus aciditrophicus SB, complete genomeglycosyltransferase1e-0757
NC_014758:1207894:120789412078941208721828Calditerrivibrio nitroreducens DSM 19672 chromosome, completeglycosyl transferase family 22e-0756.6
NC_018679:1858448:187574218757421876656915Alteromonas macleodii str. 'Balearic Sea AD45' chromosome, completeglycosyl transferase family protein4e-0755.5
NC_020409:77414:863778637787180804Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completehypothetical protein4e-0755.1
NC_013757:421760:4262104262104273041095Geodermatophilus obscurus DSM 43160, complete genomeglycosyl transferase family 28e-0754.3
NC_019904:3072241:307881730788173079809993Echinicola vietnamensis DSM 17526 chromosome, complete genomeglycosyl transferase family protein9e-0754.3
NC_017062:547317:547317547317548159843Rickettsia typhi str. B9991CWPP chromosome, complete genomeglycosyltransferase9e-0650.8