Pre_GI: BLASTP Hits

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Query: NC_008228:3841897:3847863 Pseudoalteromonas atlantica T6c, complete genome

Start: 3847863, End: 3848729, Length: 867

Host Lineage: Pseudoalteromonas atlantica; Pseudoalteromonas; Pseudoalteromonadaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Isolated from a biofilm from San Diego Bay in California. Marine biofilm bacterium associated with shell disease in shellfish. A common marine bacterium that exists both in the water column, and in biofilms attached to surfaces. This organism produces a well characterized, commercially important agarase. Pseudoalteromonas atlantica has been isolated from lesions on crabs with shell disease. Shell disease is characterized by progressive degradation of the shell, often leading to an infection of the hemolymph (blood) and may be caused by Pseudoalteromonas, Alteromonas, Vibrio, or other marine organisms. In addition to producing extracellular enzymes which attack the shell, Pseudoalteromonas atlantica produces a the lipopolysaccharide which has been shown to be a potential virulence factor in shell disease.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010468:1775000:179109217910921791979888Escherichia coli ATCC 8739, complete genomeglycosyl transferase family 25e-51201
NC_018868:569423:579542579542580405864Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomerhamnosyltransferase3e-44179
NC_010508:933862:938441938441939340900Burkholderia cenocepacia MC0-3 chromosome 1, complete sequencerhamnosyltransferase2e-27122
NC_012968:1108687:112544511254451126395951Methylotenera mobilis JLW8, complete genomerhamnosyltransferase2e-27122
NC_014207:1366766:137902513790251379933909Methylotenera sp. 301 chromosome, complete genomerhamnosyltransferase6e-25114
NC_010622:2576110:259994125999412600852912Burkholderia phymatum STM815 chromosome 1, complete sequencerhamnosyltransferase1e-24113
NC_008553:1038344:104944910494491050342894Methanosaeta thermophila PT, complete genomeglycosyl transferase, family 28e-22104
NC_017328:2153083:216732721673272168217891Shigella flexneri 2002017 chromosome, complete genomedTDP-rhamnosyl transferase rfbF4e-21102
NC_004741:2081649:209589320958932096783891Shigella flexneri 2a str. 2457T, complete genomedTDP-rhamnosyl transferase4e-21102
NC_007606:1999870:201345420134542014365912Shigella dysenteriae Sd197, complete genomerhamnosyl transferase I6e-21101
NC_004337:2098736:211302621130262113916891Shigella flexneri 2a str. 301, complete genomedTDP-rhamnosyl transferase1e-20100
NC_014562:2049921:205788920578892058638750Pantoea vagans C9-1 chromosome, complete genomedTDP-rhamnosyl transferase3e-2099.4
NC_012691:3126500:313712831371283137997870Tolumonas auensis DSM 9187, complete genomerhamnosyltransferase4e-2098.6
NC_020541:625925:646324646324647262939Rhodanobacter sp. 2APBS1, complete genomeputative glycosyltransferase6e-2098.2
NC_010995:4117963:413709041370904137989900Cellvibrio japonicus Ueda107, complete genomeglycosyl transferase, putative, gt2D7e-1994.7
NC_010125:3467379:348094034809403481905966Gluconacetobacter diazotrophicus PAl 5, complete genomeputative glycosyl transferase8e-1994.4
NC_013199:2058857:207328120732812074099819Lactobacillus rhamnosus Lc 705, complete genomeglycosyltransferase (WelH)2e-1893.6
NC_004342:1648977:166515416651541666065912Leptospira interrogans serovar Lai str. 56601 chromosome I,dTDP-rhamnosyl transferase rfbF3e-1892.4
NC_014306:3210311:324994332499433250839897Erwinia billingiae Eb661, complete genomeRhamnosyltransferase5e-1892
NC_012691:3126500:313622231362223137103882Tolumonas auensis DSM 9187, complete genomeglycosyl transferase family 29e-1890.9
NC_009483:3544333:355464535546453555556912Geobacter uraniireducens Rf4 chromosome, complete genomeglycosyltransferase-like protein3e-1789.4
NC_008258:2100646:211489121148912115652762Shigella flexneri 5 str. 8401, complete genomedTDP-rhamnosyl transferase4e-1788.6
NC_015731:447411:452489452489453412924Nitrosomonas sp. Is79A3 chromosome, complete genomerhamnosyltransferase3e-1685.9
NC_010682:661272:669138669138670064927Ralstonia pickettii 12J chromosome 1, complete sequencerhamnosyltransferase3e-1685.9
NC_015556:4074367:408273840827384083694957Pseudomonas fulva 12-X chromosome, complete genomeglycosyl transferase family 23e-1479.3
NC_015385:1406419:142693714269371427650714Treponema succinifaciens DSM 2489 chromosome, complete genomeglycosyl transferase family protein3e-1479.3
NC_011026:2450325:246779324677932468668876Chloroherpeton thalassium ATCC 35110, complete genomeglycosyl transferase family 23e-1479
NC_015376:903939:905671905671906609939Burkholderia gladioli BSR3 chromosome chromosome 2, completeRhamnosyltransferase1e-1273.9
NC_010610:107500:117881117881118753873Lactobacillus fermentum IFO 3956, complete genomeputative glycosyltransferases2e-1273.2
NC_021066:460292:479609479609480475867Raoultella ornithinolytica B6, complete genomedtdp-rhamnosyl transferase rfbf protein4e-1272.4
NC_020210:3341976:340168834016883402599912Geobacillus sp. GHH01, complete genomedTDP-rhamnosyl transferase2e-1067
NC_020541:1014176:102126210212621022212951Rhodanobacter sp. 2APBS1, complete genomeputative glycosyltransferase2e-0963.5
NC_010658:1090104:110671711067171107664948Shigella boydii CDC 3083-94, complete genomeWbwY5e-0961.6
NC_017217:1607679:164823116482311649067837Bifidobacterium animalis subsp. lactis V9 chromosome, completeglycosyl transferase family protein1e-0860.5
NC_017216:1603000:164259016425901643426837Bifidobacterium animalis subsp. lactis BLC1, complete genomeglycosyltransferase, group 2 family protein1e-0860.5
NC_017215:1605917:164757816475781648414837Bifidobacterium animalis subsp. lactis CNCM I-2494 chromosome,Hexosyltransferase1e-0860.5
NC_017214:299637:340173340173341009837Bifidobacterium animalis subsp. lactis BB-12 chromosome, completeRfbF1e-0860.5
NC_012814:1599241:164294416429441643780837Bifidobacterium animalis subsp. lactis Bl-04, complete genomeglycosyl transferase family protein1e-0860.5
NC_012815:1603916:164266216426621643498837Bifidobacterium animalis subsp. lactis DSM 10140, complete genomeglycosyl transferase family protein1e-0860.5