Pre_GI: BLASTP Hits

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Query: NC_008228:3841897:3844112 Pseudoalteromonas atlantica T6c, complete genome

Start: 3844112, End: 3844786, Length: 675

Host Lineage: Pseudoalteromonas atlantica; Pseudoalteromonas; Pseudoalteromonadaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Isolated from a biofilm from San Diego Bay in California. Marine biofilm bacterium associated with shell disease in shellfish. A common marine bacterium that exists both in the water column, and in biofilms attached to surfaces. This organism produces a well characterized, commercially important agarase. Pseudoalteromonas atlantica has been isolated from lesions on crabs with shell disease. Shell disease is characterized by progressive degradation of the shell, often leading to an infection of the hemolymph (blood) and may be caused by Pseudoalteromonas, Alteromonas, Vibrio, or other marine organisms. In addition to producing extracellular enzymes which attack the shell, Pseudoalteromonas atlantica produces a the lipopolysaccharide which has been shown to be a potential virulence factor in shell disease.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015497:1287877:133123113312311331929699Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genomehypothetical protein1e-68259
NC_008570:3220539:323006032300603230749690Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomehypothetical protein8e-1890.5
NC_015061:3840463:390294539029453903601657Rahnella sp. Y9602 chromosome, complete genomelipoprotein YmcC1e-1583.6
NC_016818:3887000:391359339135933914249657Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completehypothetical protein1e-1479.7
NC_008322:1595500:162730916273091628019711Shewanella sp. MR-7, complete genomelipoprotein, putative2e-1479.3
NC_008321:1523323:155589915558991556609711Shewanella sp. MR-4, complete genomelipoprotein, putative3e-1478.6
NC_013421:3279499:328029132802913280968678Pectobacterium wasabiae WPP163, complete genomeputative lipoprotein4e-1478.2
NC_012917:1506083:153907115390711539748678Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeputative lipoprotein1e-1376.6
NC_008750:1659095:167870716787071679417711Shewanella sp. W3-18-1, complete genomelipoprotein, putative3e-1375.5
NC_016602:103878:144149144149144826678Vibrio furnissii NCTC 11218 chromosome 1, complete sequenceWbfD protein2e-1169.3
NC_009783:670449:670449670449671123675Vibrio harveyi ATCC BAA-1116 chromosome I, complete sequencehypothetical protein2e-0858.9
NC_015633:461143:462009462009462707699Vibrio anguillarum 775 chromosome chromosome I, complete sequenceWbfD8e-0857.4
NC_007492:4310828:433379243337924334457666Pseudomonas fluorescens PfO-1, complete genomehypothetical protein8e-0753.9