Pre_GI: BLASTP Hits

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Query: NC_008228:372520:388003 Pseudoalteromonas atlantica T6c, complete genome

Start: 388003, End: 389298, Length: 1296

Host Lineage: Pseudoalteromonas atlantica; Pseudoalteromonas; Pseudoalteromonadaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Isolated from a biofilm from San Diego Bay in California. Marine biofilm bacterium associated with shell disease in shellfish. A common marine bacterium that exists both in the water column, and in biofilms attached to surfaces. This organism produces a well characterized, commercially important agarase. Pseudoalteromonas atlantica has been isolated from lesions on crabs with shell disease. Shell disease is characterized by progressive degradation of the shell, often leading to an infection of the hemolymph (blood) and may be caused by Pseudoalteromonas, Alteromonas, Vibrio, or other marine organisms. In addition to producing extracellular enzymes which attack the shell, Pseudoalteromonas atlantica produces a the lipopolysaccharide which has been shown to be a potential virulence factor in shell disease.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007802:1240989:1247519124751912487781260Jannaschia sp. CCS1, complete genomehypothetical protein7e-81301
NC_014364:1990000:1995493199549319977872295Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeGlycogen debranching protein1e-1791.7
NC_008262:419726:4380444380444406022559Clostridium perfringens SM101, complete genomecell wall surface anchor family protein2e-1687.4