Pre_GI: BLASTP Hits

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Query: NC_008228:2295841:2307700 Pseudoalteromonas atlantica T6c, complete genome

Start: 2307700, End: 2309031, Length: 1332

Host Lineage: Pseudoalteromonas atlantica; Pseudoalteromonas; Pseudoalteromonadaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Isolated from a biofilm from San Diego Bay in California. Marine biofilm bacterium associated with shell disease in shellfish. A common marine bacterium that exists both in the water column, and in biofilms attached to surfaces. This organism produces a well characterized, commercially important agarase. Pseudoalteromonas atlantica has been isolated from lesions on crabs with shell disease. Shell disease is characterized by progressive degradation of the shell, often leading to an infection of the hemolymph (blood) and may be caused by Pseudoalteromonas, Alteromonas, Vibrio, or other marine organisms. In addition to producing extracellular enzymes which attack the shell, Pseudoalteromonas atlantica produces a the lipopolysaccharide which has been shown to be a potential virulence factor in shell disease.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015703:3746057:3767830376783037690741245Runella slithyformis DSM 19594 chromosome, complete genomehypothetical protein1e-54214
NC_020054:3501467:3516967351696735184151449Fibrella aestuarina BUZ 2 drat genomehypothetical protein5e-31135